Gene Pmen_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1910 
Symbol 
ID5110038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2101079 
End bp2101537 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content66% 
IMG OID640503141 
ProductMarR family transcriptional regulator 
Protein accessionYP_001187404 
Protein GI146306939 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0578168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.331204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT TCGATACCGC CGGGCTGCAG CTGGACAACC AGCTGTGCTT CAAGCTTTAC 
GCCGCCTCGC GCGCGGTCAT ACGCGCCTAC AAGCCGATGC TCGATGCCCT CGGTCTGACC
TACCCGCAGT ACCTGGCGAT GCTGGTGCTG TGGGAGTGGC AGGAGCAGGC CCCCGAACAG
CCGACGCTCA AGGCGCTCGG ACAACGCCTG CAGCTGGATT CGGGCACCCT CACGCCCTTG
CTCAAGCGCC TGGAGCAGAT GGGGCTGGTG CTGCGTCGCC GCGCCGAGGC GGATGAGCGT
GAGGTGCATC TGACCCTGAG CGAGGCAGGC AGAGCGTTGC GGGCGCAGGT CGCCCCGCTC
AAGGCGCAGC TGCTGTGTCA GCTGGGCGAT GATGATCTGC TGGAAATGGA TGGCCTGCGC
CGCAGCCTGG ATCGTCTGCT GACCCGCTTC AGCGCGTGA
 
Protein sequence
MTAFDTAGLQ LDNQLCFKLY AASRAVIRAY KPMLDALGLT YPQYLAMLVL WEWQEQAPEQ 
PTLKALGQRL QLDSGTLTPL LKRLEQMGLV LRRRAEADER EVHLTLSEAG RALRAQVAPL
KAQLLCQLGD DDLLEMDGLR RSLDRLLTRF SA