Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1910 |
Symbol | |
ID | 5110038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2101079 |
End bp | 2101537 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503141 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001187404 |
Protein GI | 146306939 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0578168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.331204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCTT TCGATACCGC CGGGCTGCAG CTGGACAACC AGCTGTGCTT CAAGCTTTAC GCCGCCTCGC GCGCGGTCAT ACGCGCCTAC AAGCCGATGC TCGATGCCCT CGGTCTGACC TACCCGCAGT ACCTGGCGAT GCTGGTGCTG TGGGAGTGGC AGGAGCAGGC CCCCGAACAG CCGACGCTCA AGGCGCTCGG ACAACGCCTG CAGCTGGATT CGGGCACCCT CACGCCCTTG CTCAAGCGCC TGGAGCAGAT GGGGCTGGTG CTGCGTCGCC GCGCCGAGGC GGATGAGCGT GAGGTGCATC TGACCCTGAG CGAGGCAGGC AGAGCGTTGC GGGCGCAGGT CGCCCCGCTC AAGGCGCAGC TGCTGTGTCA GCTGGGCGAT GATGATCTGC TGGAAATGGA TGGCCTGCGC CGCAGCCTGG ATCGTCTGCT GACCCGCTTC AGCGCGTGA
|
Protein sequence | MTAFDTAGLQ LDNQLCFKLY AASRAVIRAY KPMLDALGLT YPQYLAMLVL WEWQEQAPEQ PTLKALGQRL QLDSGTLTPL LKRLEQMGLV LRRRAEADER EVHLTLSEAG RALRAQVAPL KAQLLCQLGD DDLLEMDGLR RSLDRLLTRF SA
|
| |