Gene Pmen_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1887 
Symbol 
ID5110016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2078132 
End bp2078629 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID640503119 
Productmethylated-DNA--protein-cysteine methyltransferase 
Protein accessionYP_001187382 
Protein GI146306917 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.540454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.821107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTATC GCTATCACGA CAGCCCGGTC GGCCCCCTGC TGCTTGCCGC CGACGAAAAC 
GGCCTGCAGC TACTACTGAT GGAACTGGAC AGCCGCCCCT GGCGCATCGA GGAAAGCTGG
CAACCCGCCA GCCGCGAACT GGATGCCGTG TGCCGCCAGC TCGACGAATA CTTTGCCGGC
AAACGCCGAC GTTTCGAGGT TCGCCTGGCC CCGCGCGGCA CGGCCTTTCA GCAGGCGGTC
TGGCAGGCGC TGCAGGCCAT TCCCTACGGC CGCACCTGCA GCTATTCCGA GCTGGCCGGC
GTCATTGGCC GGCCCCATGC CGTGCGCGCA GTAGGCACGG CCAACGGTGC CAACCCCATC
TCCATCATCG TGCCCTGCCA TCGAGTGATC GGCCGCAACG GCAGCCTGAC CGGCTACGCC
GGCGGCCTGC CGCGCAAGCA GCAGTTGCTG GAGCTGGAGG GCGCGCTGCT ATCGCAGCAG
ACACAGCTGG CGCTTTGA
 
Protein sequence
MHYRYHDSPV GPLLLAADEN GLQLLLMELD SRPWRIEESW QPASRELDAV CRQLDEYFAG 
KRRRFEVRLA PRGTAFQQAV WQALQAIPYG RTCSYSELAG VIGRPHAVRA VGTANGANPI
SIIVPCHRVI GRNGSLTGYA GGLPRKQQLL ELEGALLSQQ TQLAL