| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1882 |
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| Symbol | |
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| ID | 5110011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2074415 |
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| End bp | 2075506 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503114 |
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| Product | chorismate synthase |
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| Protein accession | YP_001187377 |
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| Protein GI | 146306912 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.501466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.394588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCA ATACCTACGG CAAGCTGTTC ACCGTCACCA CCGCTGGCGA AAGCCATGGC
CCGGCCCTGG TCGCCATCGT CGACGGTTGC CCACCGGGCC TGGAATTGTC GCTGGAGGAC
ATGCAGCGCG ATCTCGACCG ACGCAAGCCG GGCACCAGCC GCCACACCAC GCAGCGCCAG
GAAGACGACG TGGTGGAGAT TCTTTCCGGC GTGTTCGAAG GCAAGACCAC CGGTTGCGCC
ATCGGTTTGC TGATCCGCAA CACCGACCAG AAGTCCAAGG ACTACTCGGC GATCAAGGAT
CTGTTCCGTC CGGCCCACGC CGACTACACC TACCACCACA AGTACGGCAT CCGCGACTAC
CGTGGCGGCG GCCGCAGTTC GGCGCGCGAG ACCGCCATGC GCGTGGCCGC CGGCGCCATC
GCCAAGAAGT ACCTGGCCAC GCAAGGGATC CAGGTGCGCG GCTATATGAG CCAGCTCGGC
CCCATCGAGA TTCCGTTCAA GACCTGGGAC AGCGTCGAGC AGAACGCCTT CTTTAGCCCC
GATCCGGACA AGGTGCCTGC GCTTGAGACC TACATGGATC AGTTGCGTCG CGACCAGGAT
TCGGTCGGCG CGAAGATCAC CGTGGTCGCC GAGGGGGTGA TGCCGGGACT TGGCGAGCCG
ATCTTCGACC GCCTCGACGC CGAGCTGGCC CACGCGCTGA TGAGCATCAA CGCGGTCAAG
GGCGTGGAGA TCGGCGCAGG TTTTGCCAGC GTCAGTCAGC GCGGCACCGA GCACCGTGAC
GAGCTGACGC CCGAAGGCTT CCTGTCCAAC AACGCCGGCG GCATTCTTGG CGGTATTTCC
AGTGGTCAGC CCATCGTTGC CCACCTGGCG CTCAAGCCCA CCTCCAGCAT CACCACGCCG
GGTCGTTCCA TCGACATCGA CGGCAACCCG GTAGAAGTCA TTACCAAGGG GCGCCACGAT
CCCTGCGTGG GCATCCGCGC CACGCCGATC GCCGAGGCGA TGATGGCCAT CGTGCTGATG
GATCATCTGC TGCGTCATCG CGCGCAGAAT GCCGAGGTGC GCGTGGCGAC GCCGGTGCTG
CCGCAGCTGT GA
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| Protein sequence | MSGNTYGKLF TVTTAGESHG PALVAIVDGC PPGLELSLED MQRDLDRRKP GTSRHTTQRQ
EDDVVEILSG VFEGKTTGCA IGLLIRNTDQ KSKDYSAIKD LFRPAHADYT YHHKYGIRDY
RGGGRSSARE TAMRVAAGAI AKKYLATQGI QVRGYMSQLG PIEIPFKTWD SVEQNAFFSP
DPDKVPALET YMDQLRRDQD SVGAKITVVA EGVMPGLGEP IFDRLDAELA HALMSINAVK
GVEIGAGFAS VSQRGTEHRD ELTPEGFLSN NAGGILGGIS SGQPIVAHLA LKPTSSITTP
GRSIDIDGNP VEVITKGRHD PCVGIRATPI AEAMMAIVLM DHLLRHRAQN AEVRVATPVL
PQL
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