| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1875 |
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| Symbol | |
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| ID | 5110004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2066639 |
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| End bp | 2067655 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640503106 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001187370 |
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| Protein GI | 146306905 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.939641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTA TGGTTCTGAT AGCGGTCATC GCTATCGTGG CGTGGGGGCT TACGGCACTG
TTGCGACGCT ACGCGCTGGC CCGCAGCCTG ATGGATATAC CCAACGCGCG CAGTTCACAC
AGCCAACCAA CGCCGCGTGG AGGAGGCGTT GCCATTGTGG TGGCATTCCT CCTGGGCTTA
TGCGTTGCGT CGGCTACAGG TCTGGATCTG CCAGCGGAGA TTTATTACTC GCTGCTAGGC
TCAGGTTCGG CAATTGCATT GCTGGGATTT CTTGATGACC ACGGTCACAT TGCCGCCCGC
TGGCGTTTGC TCGGGCATTT CGCTGCTGCT GCTTGGGCAC TTTTCTGGCT CGGCGGGCTG
CCTCCGCTGG TAATGGTTGG CCACTCAATT GATTTTGGTT GGTTGGGTTA TTTGCTGGCC
TCTTTGTATC TGGTTTGGTT GCTCAACCTT TACAACTTCA TGGATGGAAT CGACGGCATT
GCCAGCATCG AGGCGATCTG TGTGTGTTTG GGTGGCGCTC TGTTGTATGT CCTTCACGGG
CATACCGATG CTGCAGCACT GCCGCTGTTG TTGTCATTTG CGGTGGCGGG ATTTCTTTAC
TGGAATTTTC CCCCTGCAAA AATCTTCATG GGCGATGCTG GTAGCGGCTT TCTAGGCGTT
GTGCTTGGCG TTCTTTCCTT GCAGGCGGCG TGGATCGATC AATCCTTGCT TTGGGGCTGG
CTTATCTTGT TGGGTGTTTT CGTAGTGGAT GCGACTTTTA CTCTACTCCG GCGTTTGCTG
CGCGGAGACA AGGTTTATGA AGCTCATCGA AGCCACGCGT ATCAATACGC CTCGCGTCAG
TTCGACCGAC ATCTGCCGGT TACTCTGGCG GTAGCCGCGA TCAATCTCTG CTGGCTGTTG
CCGGTTGCAA TATGGGTAGT GCAAGGTGGC GATGGTTTGG TGGGACTATT GTTGGCTTAC
GCGCCTTTGA TAGTGCTGGC TATCAAATTC CGTGCTGGCG AATTGGAGCG TAGATGA
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| Protein sequence | MKVMVLIAVI AIVAWGLTAL LRRYALARSL MDIPNARSSH SQPTPRGGGV AIVVAFLLGL
CVASATGLDL PAEIYYSLLG SGSAIALLGF LDDHGHIAAR WRLLGHFAAA AWALFWLGGL
PPLVMVGHSI DFGWLGYLLA SLYLVWLLNL YNFMDGIDGI ASIEAICVCL GGALLYVLHG
HTDAAALPLL LSFAVAGFLY WNFPPAKIFM GDAGSGFLGV VLGVLSLQAA WIDQSLLWGW
LILLGVFVVD ATFTLLRRLL RGDKVYEAHR SHAYQYASRQ FDRHLPVTLA VAAINLCWLL
PVAIWVVQGG DGLVGLLLAY APLIVLAIKF RAGELERR
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