| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1874 |
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| Symbol | |
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| ID | 5110003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2065680 |
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| End bp | 2066642 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640503105 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001187369 |
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| Protein GI | 146306904 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTTC TGCTGACTGG CGCCAGCGGC TTCGTTGGCC GTGCCGTACA GGCGCGCTTG
CTGGTCGATG GTGTGCATCG GTTGCGCTGT GCCCAGCGCA AGGCACCGAT TACTCCAGTT
GTCGGGGTGG AGTACTGCCA GGCACCGTCG CTGGAGGCTG AGGCCGACTG GTCGCTGGCG
CTCGCGGGCG TCGATGCGGT CATTCACTGC GCTGCACGGG TGCACGTGAT GCATGAACAG
GCTGCCGATC CGCTGGCGGA GTTTCGTCGA GCCAACGTCG TGGGCACGCT GCGTCTGGCT
CGTCAGGCTG TGGCAGCGGG CGTAAGGCGT TTCGTCTTCG TCAGCTCGAT CAAGGTCAAC
GGTGAGCAGA CTCTCCCAGG GCAAGCTTAT AGAGCCGATG ATATTTCGAA TGCGACGGAC
CCGTACGGCA TCTCAAAACG AGAGGCTGAG GATGAATTGC TGGCCCTTGC TGCCGAAACA
GGGCTAGAGG TGGTCATTGT CCGCCCGCCT TTGATCTATG GCCCCGGGGT CAAGGCCAAC
TTCTTGAGCA TGATGCGCTG GTTGCAGCGG GGGGTACCGT TGCCCTTCGG TGCCATAGAT
AACCGCCGCA GTCTGGTTGC ACTGGATAAT CTGGTGGACT TGTTGGTTGT GTGCCTTACC
CATCCGGCGG CCAGCGGGCA GCGGTTTCTG GTCAGCGACG GCGAGGATCT GTCTACTACC
GAGTTACTGC GTCGCCTGAG TGCCGCTCTC GGGCGTCCGG CGCGGCTCTT GCCAGTGCCG
CAGGCGTTGA TTACGCAGGC TGCGATCATG CTGGGGCGTC GCCAGTTGAG TCAGCGCCTG
TGTGGTTCGT TGCAGATCAA CATGGACAAG ACGCGTGAGC GATTGGATTG GACTCCACCG
TTTACGGTTG ATCAAGCGCT AGCTAAGACA GCTGCGCACT ATTTAAAAGA ACTCTCTAGA
TGA
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| Protein sequence | MRVLLTGASG FVGRAVQARL LVDGVHRLRC AQRKAPITPV VGVEYCQAPS LEAEADWSLA
LAGVDAVIHC AARVHVMHEQ AADPLAEFRR ANVVGTLRLA RQAVAAGVRR FVFVSSIKVN
GEQTLPGQAY RADDISNATD PYGISKREAE DELLALAAET GLEVVIVRPP LIYGPGVKAN
FLSMMRWLQR GVPLPFGAID NRRSLVALDN LVDLLVVCLT HPAASGQRFL VSDGEDLSTT
ELLRRLSAAL GRPARLLPVP QALITQAAIM LGRRQLSQRL CGSLQINMDK TRERLDWTPP
FTVDQALAKT AAHYLKELSR
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