| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1870 |
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| Symbol | |
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| ID | 5109999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2061888 |
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| End bp | 2062745 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640503101 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001187365 |
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| Protein GI | 146306900 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.151369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTTT TGGTCCTAGG CGTTACTGGC ATGCTTGGCA ATGCCGTTTT TCGTGTTTTT
TCCGCTGATG CGGCTTATCA GGCCTGGGGC ACGCTGCGCA GTGCTTCGGC TCTGCATCAC
TTTCCGCAGG ATAGCCATGC ACGCTTGCTC TGTGGTGTTG ATGTACTGGA CCAGGATACG
TTGACTTCCG TCATGGCCCG GGTGAAGCCG GACGTGGTGA TCAATTGCGT CGGGCTGATC
AAGCAATTGG CCGATGCCAA TGATCCGCTC ACCGCGCTAC CGATCAACGC CATGCTGCCG
CATCGCTTGG CTCGACTTTG CGAGCTTGCA GGCGCTCGGC TGATTCATGT GAGCACTGAT
TGTGTGTTCT CCGGGCGTAA AGGAATGTAT GTGGAGGGCG ATTTATCGGA TGCCGAGGAT
CTGTACGGTA AGTCCAAGTA TATTGGGGAG CTGCATGAGT GGCCGAATGC CATTACACTG
CGTACCTCGA TCATCGGCCA TGAGCTGGGA AGCTGCCATG CGCTGGTCGA TTGGTTCTTG
TCCCAACAGA ACGGGGTCTT GGGTTTTGCC AGGGCAGTTT TTTCCGGCTT GCCCACTGTG
GAGTTGGCGC GTGTGATGAA GGATTTTGTC ATTCCACATA CCGAACTTGC TGGCTTGTAT
CAGGTTGCCG CGGAGCCGAT CACTAAGCTG GATCTGCTAC GTCTACTCGC TGCGCAATAT
GGCAAGCAGA TCGAAATTAA TCCAGATAGT TCGGTGGTGA TCGACCGCTC GTTGGATGGT
TCGCGTTTTC GCAATGCCAC GGGTTATGTG GCCCCGGCTT GGCCAGAGCT TGTGCGAGTG
ATGTTTGAGC GACGTTAG
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| Protein sequence | MRVLVLGVTG MLGNAVFRVF SADAAYQAWG TLRSASALHH FPQDSHARLL CGVDVLDQDT
LTSVMARVKP DVVINCVGLI KQLADANDPL TALPINAMLP HRLARLCELA GARLIHVSTD
CVFSGRKGMY VEGDLSDAED LYGKSKYIGE LHEWPNAITL RTSIIGHELG SCHALVDWFL
SQQNGVLGFA RAVFSGLPTV ELARVMKDFV IPHTELAGLY QVAAEPITKL DLLRLLAAQY
GKQIEINPDS SVVIDRSLDG SRFRNATGYV APAWPELVRV MFERR
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