| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1860 |
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| Symbol | |
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| ID | 5109990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2050650 |
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| End bp | 2051738 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640503092 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001187356 |
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| Protein GI | 146306891 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.169913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGAAT TCATCGATCT CAAGGCACAA CAGGCGCTGA TCAAAGACAA GATCGATGCC
AATATCCAAC GAGTATTGGC GCATGGTCAG TACATTCTTG GTCCGGAAGT GGCGGAGCTG
GAGGAGAAAC TGGCGGCCTT CGTGGGCGCC AAATACTGCA TCAGCGTGGC CAACGGCACC
GATGCGCTGC AGATTGCACA GATGGCGCTG GGCATCGGTC CGGGCGATGA AGTGATCACC
CCGGGTTTCA CCTATATCGC GACCGCAGAA ACCGTCGCTC TGTTAGGGGC AAAACCGGTG
TACGTGGATG TCGATCCGCG TACCTACAAC CTTGATCCGC AGTTGCTCGA GGCGGCTATC
ACGCCGCGTA CCAAGGCGAT CATCCCTGTT TCGCTGTATG GCCAATGTGC CGACTTCGAT
GCGATCAATG CCATTGCTGC CAGATACGGT ATCCCGGTGA TCGAAGATGC CGCGCAGAGT
TTCGGAGCTA CCTACAAAGG CAAGCGCTCC TGCAACCTGA CGACTATTGC ATGCACCAGC
TTTTTCCCGA GCAAACCCCT CGGTTGCTAT GGCGATGGTG GGGCGATTTT CACTAACGAT
GACGAATTGG CCAAGGTAAT GCGGCAGATC GCTCGTCATG GACAGGACCG TCGTTATCAC
CACATCCGCG TTGGTGTTAA CAGCCGTCTT GACACCTTGC AGGCAGCCAT CCTGCTGCCC
AAGCTGGATA TCTTTTCGCA CGAGCTGGAG CTGCGTGAGC AAGTTGCTCG GCGTTATGCC
TGTCTGTTGG GGGCTGCTGG TATTGCCGCC CCTTTTATTG AAGATCACAA CCATAGCGCT
TGGGCTCAGT ACACCGTGCA GGTCGAGGCG CGTGACAAGG TACAAGAGCA CTTCAAAGTA
GCAGGTGTAC CCACGGCCGT GCATTACCCT ATTCCACTCA ATCGTCAGCC TGCCGTGCAT
GACGACACAG CCTCGCTGCC TGTCGGTGAT TCAATCGCCG AGCGAGTGAT GAGTTTGCCG
ATGCACCCCT ATTTGCAAGA AAGCAGCCTG TCAGTGATCG TAGAAACCTT GGCGAAGGGG
ATTCAATGA
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| Protein sequence | MIEFIDLKAQ QALIKDKIDA NIQRVLAHGQ YILGPEVAEL EEKLAAFVGA KYCISVANGT
DALQIAQMAL GIGPGDEVIT PGFTYIATAE TVALLGAKPV YVDVDPRTYN LDPQLLEAAI
TPRTKAIIPV SLYGQCADFD AINAIAARYG IPVIEDAAQS FGATYKGKRS CNLTTIACTS
FFPSKPLGCY GDGGAIFTND DELAKVMRQI ARHGQDRRYH HIRVGVNSRL DTLQAAILLP
KLDIFSHELE LREQVARRYA CLLGAAGIAA PFIEDHNHSA WAQYTVQVEA RDKVQEHFKV
AGVPTAVHYP IPLNRQPAVH DDTASLPVGD SIAERVMSLP MHPYLQESSL SVIVETLAKG
IQ
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