Gene Pmen_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1859 
Symbol 
ID5109989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2050069 
End bp2050653 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content57% 
IMG OID640503091 
ProductSerine acetyltransferase-like protein 
Protein accessionYP_001187355 
Protein GI146306890 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.127737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACT ACCAGCATCC CAGCGCCATC GTCGATGAGG GCGCACAAAT TGGCGAAGGT 
TCGCGTATCT GGCATTTCGT GCACGTATGC GCGGGCGCTC GGATTGGCCA AGGTGTGTCC
CTGGGGCAAA ACGTATTCGT CGGTAACAAG GTGCTGATCG GCGATCATTG CAAGATCCAG
AACAACGTCT CTGTGTATGA CAACGTCACA CTCGAGGAAG GCGTCTTCTG CGGTCCGAGT
ATGGTTTTCA CCAACGTCTA CAACCCACGT TCGCTGATCG AGCGCAAGAG CGAATATCGA
GACACCTTGG TGAAGAAGGG CGCCACGTTA GGTGCAAACT GCACCATCGT CTGCGGCGTC
ACCATTGGCG AGTTCGCCTT CATAGGCGCA GGCGCAGTAG TCAACAAGGA TGTGCCGGCC
TATGCACTGA TGGTTGGGGT TCCTGCCCGG CATATAGGCT GGATGAGCGA GCATGGCGAG
CAGCTGGATC TGCCGCTAAC CGGGCAGGGG AGTGCGCCAT GCATTCACTC CGGGGAGCGC
TATGTGCTTG AGGGCAGCAT TCTGAGAAAG GAGCAACCGC AGTGA
 
Protein sequence
MSYYQHPSAI VDEGAQIGEG SRIWHFVHVC AGARIGQGVS LGQNVFVGNK VLIGDHCKIQ 
NNVSVYDNVT LEEGVFCGPS MVFTNVYNPR SLIERKSEYR DTLVKKGATL GANCTIVCGV
TIGEFAFIGA GAVVNKDVPA YALMVGVPAR HIGWMSEHGE QLDLPLTGQG SAPCIHSGER
YVLEGSILRK EQPQ