| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1858 |
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| Symbol | |
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| ID | 5109988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2049108 |
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| End bp | 2050064 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640503090 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001187354 |
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| Protein GI | 146306889 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.28744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGA AAAGATTTGC CCTGGTCGGC GCTGCCGGTT ATATCGCGCC TCGCCATATG
CGCGCCATCA AGGACACCGG CAATCAGCTG GTCTGTGCTT ATGACATCAA TGACTCGGTC
GGTATCATCG ACAGCATCTC GCCGCAAAGT GAGTTCTTCA CCGAGTTCGA GCGGTTCCAC
GATTATGCTT CACGCCTCAA GCGTGACCCG TCGACTGCTC TCGATTACGT CTCTATCTGC
TCGCCGAACT ACCTGCACCA TCCCCATATC ACGGCTGGCT TGCGTCTCGG CTGCGACGTC
ATCTGTGAAA AGCCGCTGGT GCCGACTTCT GAGTTGCTCG ATGACCTTGT TCTGGTGGAG
CGCGAAACCG GCAAACGCCT CTACAACATT CTGCAGCTTA GACATCACCA GGCCATCATC
GATCTGAAGA AGCGCGTGGG CGCTGGCGAC AAAGAGCGCA AGCACGAAGT CGAGCTGACC
TACATCACCA GTCGCGGCAA GTGGTACATG GAGAGCTGGA AGGGCGACCC GCGCAAATCC
TTTGGCGTCG CCACGAACAT CGGTGTGCAC TTCTTCGACA TGCTGCATTT CATCTTCGGC
GCCTTGCAGC GCAACGTGGT GCACTACGTC GATAACTACA AAGCCACGGG CTACCTAGAG
TATGAGAACG CTCGCGTTCG CTGGTTCCTC TCCATCGATG CGAACGACCT GCCTGATACC
GTAAAGGGCA AGAAGCCGAC TTACCGCTCC ATCACCTGCG ATGGTGTCGA GATCGAGTTT
TCCGAGGGCT TCACTGACCT GCACACTGTC AGCTACCAGG CCATTCTCAA TGGCGATGGA
TATGACATCG AGGACGCTCG CCACTGCGTG GAAACCGTGG AGACCATCCG TACCCTGGCC
GCTACTCGTG CCCAGAACGG TGAAGATCAC CCGTTTCTTG CTCGCCTGCT GGGTTGA
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| Protein sequence | MNMKRFALVG AAGYIAPRHM RAIKDTGNQL VCAYDINDSV GIIDSISPQS EFFTEFERFH
DYASRLKRDP STALDYVSIC SPNYLHHPHI TAGLRLGCDV ICEKPLVPTS ELLDDLVLVE
RETGKRLYNI LQLRHHQAII DLKKRVGAGD KERKHEVELT YITSRGKWYM ESWKGDPRKS
FGVATNIGVH FFDMLHFIFG ALQRNVVHYV DNYKATGYLE YENARVRWFL SIDANDLPDT
VKGKKPTYRS ITCDGVEIEF SEGFTDLHTV SYQAILNGDG YDIEDARHCV ETVETIRTLA
ATRAQNGEDH PFLARLLG
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