| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1851 |
|---|
| Symbol | |
|---|
| ID | 5109981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 2039485 |
|---|
| End bp | 2040594 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640503083 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_001187347 |
|---|
| Protein GI | 146306882 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.328665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTGTG ATTTCATCGC CCTGGCCCAG CCGGGTGTGC AGAAGCTGTC CCCCTATGTG
CCGGGCAAGC CGGTCGATGA GCTGGCCCGC GAGCTGGGCC TCGACCCGGC CGGTATCGTC
AAGCTGGCCA GCAACGAAAA TCCGCTCGGC CCCAGCGCCA AGGCGCTGGC CGCGATCCGT
GCCGAGCTGG ACGAGCTGAC CCGCTATCCC GACGGCAACG GCTTCACCCT CAAGAGCGCG
CTGGCCGCGC GTTATGGCGT GGATGCGGCT CAGGTCACCC TGGGCAACGG CTCCAACGAC
ATCCTCGAGC TGGTCGCTCG CGCCTACCTG GCGCCTGGCC TCAACGCCGT GTTCAGCGAC
TACGCCTTCG CCGTCTACCC CATCGCTACT CAGGCCGTCG GCGCGCAGGG CAAGGTGGTG
CCGGCCAGGG ACTACGGTCA CGATCTGGAC GCGATGCTGG CGGCCATCGA CGACAACACG
CGCGTGGTGT TCATCGCCAA CCCCAACAAT CCGACCGGCA CCTGGTTCGG TCCGGACGCG
CTGGAAGCTT TCCTGACCAA GGTGCCGGAG TCGGTGCTGG TGGTGCTGGA CGAGGCCTAT
ATCGAATACG CCGAAGGCGA CGAACTGCCC GATGGCCTGG ATTATCTGGC GCGCCATCCC
AACCTGTTGG TCTCGCGCAC CTTCTCCAAG GCCTATGGTC TGGCCGCGCT GCGCGTGGGC
TACGCGATCA GCTCGCCGGC CATCGCCGAC GTGCTCAACC GCGTGCGCCA GCCGTTCAAC
GTCAACAGCC TGGCCCTGGC CGCTGCCTGC GCCGCGTTGT CCGATGCCGA GTACCTGGCC
GAGAGCCGTC GCCTCAACGA CGCCGGCATG CAACAGCTGC AGGACGGCCT GCGCGCGCTG
GATCTGAGCT GGATTCCCTC CAAGGGCAAC TTCATCGCCG TCGACTTCGG TCGCGATACC
GCTGCGATCA ATCAGGCGCT GCTGCGTGAA GGGGTGATCG TGCGGCCGAT GGCCGGTTAC
CGCATGCCCA ACTTCCTGCG CGTATCCATC GGCTTGCCGC GCGAGAATGC CCGTTTCCTG
GAGGCCCTGG CCAAGGTGTT GTCGGCGTGA
|
|---|
| Protein sequence | MTCDFIALAQ PGVQKLSPYV PGKPVDELAR ELGLDPAGIV KLASNENPLG PSAKALAAIR
AELDELTRYP DGNGFTLKSA LAARYGVDAA QVTLGNGSND ILELVARAYL APGLNAVFSD
YAFAVYPIAT QAVGAQGKVV PARDYGHDLD AMLAAIDDNT RVVFIANPNN PTGTWFGPDA
LEAFLTKVPE SVLVVLDEAY IEYAEGDELP DGLDYLARHP NLLVSRTFSK AYGLAALRVG
YAISSPAIAD VLNRVRQPFN VNSLALAAAC AALSDAEYLA ESRRLNDAGM QQLQDGLRAL
DLSWIPSKGN FIAVDFGRDT AAINQALLRE GVIVRPMAGY RMPNFLRVSI GLPRENARFL
EALAKVLSA
|
|---|
| |