| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1850 |
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| Symbol | |
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| ID | 5109980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2038303 |
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| End bp | 2039397 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503082 |
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| Product | prephenate dehydratase |
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| Protein accession | YP_001187346 |
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| Protein GI | 146306881 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0140857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAC AGGAGCTGCA GGCGCTGCGC CTGCGCATCG ACAACCTCGA CGAGCGCATC
CTCGAGCTGA TCAGCGACCG CGCGCGCTGC GCCGAAGAAG TGGCGCGGGT GAAGATGAAG
GAGCTCAAGG AAGGCGAGTC GCCGGTGTTC TATCGCCCCG AGCGCGAGGC CCAGGTGCTC
AAGCGCATCA TGGAGCGCAA CAAGGGCCCG CTGGGCAACG AGGAAATGGC GCGGCTGTTC
CGCGAAATCA TGTCTTCCTG CCTGGCCCTG GAGAACCCGC TCAAGGTCGC CTACCTCGGC
CCCGAGGGCA CCTTCAGCCA GGCTGCGGCG ATGAAGCACT TCGGTCATGC CGTGATCAGC
GTGCCGATGG CCGCCATCGA CGAAGTGTTC CGTGAAGTGG CCGCCGGTGC GGTGAACTTC
GGCGTGGTGC CGGTGGAGAA CTCCACCGAG GGCGCGATCA ACCACACCCT CGACAGCTTC
CTCGAGCACG ACATGGTGAT CTGCGGCGAA GTCGAGCTGC GCATCCACCA TCACCTGCTG
GTCGGCGAAA CCACCAAGAC CGACAAGATC ACCCGCATCT ATTCCCATGC CCAGTCGCTG
GCGCAGTGCC GCAAGTGGCT GGACGCGCAC TACCCGAACG TCGAGCGCGT GGCGGTCTCC
AGCAACGCCG ACGCCGCCAA ACGGGTCAAG AGCGAGTGGA ACAGTGCGGC CATCGCCGGC
GACATGGCGG CCAATCTGTA TGGCCTGACC AAGCTGGCGG AAAAGATCGA GGATCGCCCG
GACAACTCCA CGCGTTTTCT CATCATCGGC AGCCAGGAAG TGCCGCCGAC CGGCGACGAC
AAGACCTCGA TCATCGTCTC CATGCGCAAC AAGCCGGGCG CGCTGCACGA ACTTCTGGTG
CCGTTCCACA ACAACGGCAT CGACCTGACC CGCATCGAGA CGCGGCCGTC GCGCAGTGGC
AAGTGGACCT ACGTGTTCTT CATCGACTTC GTCGGCCACC ACCGCGACCC GTTGATCAAG
GACGTGCTGG AGAAGATCGG CCAGGAGGCC GTGGCGCTGA AGGTGTTGGG TTCCTATCCC
AAGGCGGTAC TCTAA
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| Protein sequence | MSEQELQALR LRIDNLDERI LELISDRARC AEEVARVKMK ELKEGESPVF YRPEREAQVL
KRIMERNKGP LGNEEMARLF REIMSSCLAL ENPLKVAYLG PEGTFSQAAA MKHFGHAVIS
VPMAAIDEVF REVAAGAVNF GVVPVENSTE GAINHTLDSF LEHDMVICGE VELRIHHHLL
VGETTKTDKI TRIYSHAQSL AQCRKWLDAH YPNVERVAVS SNADAAKRVK SEWNSAAIAG
DMAANLYGLT KLAEKIEDRP DNSTRFLIIG SQEVPPTGDD KTSIIVSMRN KPGALHELLV
PFHNNGIDLT RIETRPSRSG KWTYVFFIDF VGHHRDPLIK DVLEKIGQEA VALKVLGSYP
KAVL
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