| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1848 |
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| Symbol | |
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| ID | 5109978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2034329 |
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| End bp | 2037097 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503080 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_001187344 |
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| Protein GI | 146306879 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.409783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.837325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGAAC TGGCCAAAGA AATCCTCCCG GTCAATATCG AAGACGAGCT GAAACAGTCC
TACCTCGACT ACGCGATGAG CGTGATCGTC GGGCGTGCGC TGCCGGATGC GCGCGATGGC
TTGAAGCCGG TACACCGCCG TGTGCTCTAT GCCATGAGCG AACTGGGCAA CGACTGGAAC
AAGCCCTACA AGAAATCGGC CCGTGTGGTC GGTGACGTGA TCGGTAAATA CCACCCGCAC
GGCGACACCG CGGTGTACGA CACCATCGTG CGGATGGCTC AGGACTTCTC CCTGCGCTAC
CTGCTGGTCG ACGGCCAGGG CAACTTCGGT TCGGTGGACG GCGACAACGC CGCGGCCATG
CGATACACCG AAGTGCGCAT GACCAAGCTG GCCCATGAAC TGCTGGCCGA CCTGGACAAG
GAAACCGTCG ACTGGGTGCC CAACTACGAC GGCACCGAGC AGATTCCGGC TGTGATGCCG
ACCAAGGTGC CGAACCTGCT GGTCAACGGC TCGTCCGGTA TCGCCGTGGG CATGGCCACC
AACATCCCGC CGCACAACCT CTCCGAGGTG ATCGATGGCT GCCTGGCGCT GATCGACAAC
GCTGACCTGA CCGTCGATGA CCTGATGCAG TACATCCCCG GCCCTGATTT CCCCACCGCG
GGCATCATCA ACGGCCGTGC CGGCATCATC GAGGCCTACC GTACCGGCCG CGGGCGCATC
TACATTCGCG CCCGCGTCGA GGTCGAGGAC ATCGACAAGG TCGGCGGTCG TCAGCAACTG
GTGGTCACCG AGCTGCCGTA TCAGCTGAAC AAGGCGCGTC TGATCGAGAA GATCGCCGAG
CTGGTCAAAG AGAAGAAGAT CGAAGGCATC ACCGAACTGC GCGACGAGTC CGACAAGGAT
GGTATGCGCG TGGTGATCGA GCTGCGTCGC GGCGAAGTGC CGGACGTGGT GCTGAACAAT
CTGTACGCCC AGACCCAGAT GCAGAGCGTG TTCGGCATCA ACGTCGTGGC GCTGGTCGAC
GGTCAGCCGA AGACCATGAA CCTCAAGGAC ATGCTCGAAG TGTTCGTCCG TCACCGCCGC
GAAGTGGTGA CCCGGCGTAC CGTCTACGAA CTGCGCAAGG CGCGCGAGCG CGGCCACATC
CTCGAAGGTC AGGCGGTGGC GCTGTCCAAC ATCGACCCGG TGATCGAGCT GATCAAGGCC
TCGCCGACTC CGGCCGAAGC CAAGGAGCGT CTGATCGCCA CCGCCTGGGA ATCCAGCGCG
GTCGAAGCCA TGGTCGAGCG CGCCGGCGCC GACTCCTGCC GCCCGGAAGG GCTGGATCCG
CAATACGGCC TGCGCGAAGG CAAGTACTAC CTGTCGCCGG AGCAGGCTCA GGCCATCCTC
GAACTGCGTC TGCACCGCCT CACCGGTCTG GAGCACGAGA AGCTGCTGGC CGAATACCAG
GAAATTCTCA GCCTGATCGG CGAGCTGATC CGCATCCTGA CCAGCCCCGA GCGCCTGATG
GAAGTCATCC GCGAGGAGCT GGAGAAGGTC AAGGCCGAAT TCGGCGACGC CCGTCGCACC
GAGATCATCG CCTCGCGTCA GGACCTGACC ATCGCCGATC TGATCACCGA GGAAGAGCGT
GTCGTCACCA TCTCCCATGG TGGCTATGCC AAGAGCCAGC CGCTGGCCGC CTACGAGGCG
CAGCGTCGCG GTGGCAAGGG CAAGTCCGCC ACCGGGGTGA AGGACGAGGA CTACGTCGAG
CACCTGCTGG TGGCCAACAG CCATGCGACC CTGCTGCTGT TCTCCAGCAA GGGCAAGGTC
TACTGGCTGC GCACCTTCGA AATCCCCGAG GCCTCGCGTG CCGCCCGCGG TCGTCCGCTG
GTCAACCTGC TGCCGCTGGA CGAGGGTGAG CGCATCACCG CGATGCTGCA GATCGACCTG
GAAGCCCTGC AGCAGAGCGC CGGGGCCGAC GAGGACCTGG ACGACGAAGG CCTGGTGATC
GAAGGCGAAG CCACCGAAGT GGTCGAGGCC GAGGAAGTCG AGGAAGTCGA GGGCGAAACC
CCAGAGCTGG TCGCCGAGCC GACTGGCGCC TTCATCTTCA TGGCCACCGC GTTCGGTACC
GTGAAGAAGA CTCCGCTGGT GCAGTTCAGC CGTCCGCGTA GCGCCGGCCT GATCGCCCTG
AAGCTGGAAG AGGGCGACAC CCTGATCGCC GCCGCCATCA CCGACGGCGC CAAGGAAGTC
ATGCTGTTCT CCGACGCCGG CAAGGTACTG CGTTTCGCCG AGAGCAAGGT GCGCACCATG
GGCCGTACCG CCCGCGGCGT GCGTGGCATG CGCCTGGGCA AGGATCAGCG CCTGATCTCC
ATGCTGATTC CCGAGTCCGG CGCGCAGATC CTCACCGCTT CCGAGCGCGG CTTCGGCAAG
CGCACCGGGC TGGGCAAGTT CCCCCGTCGC GGTCGTGGCG GTCAGGGCGT GATCGCCATG
GTCACCAGTG AGCGTAACGG CAAGCTGGTC GGCGCCATCC AGGTACAGGA CGGCGAGGAA
ATCATGCTGA TTTCCGACCA GGGCACCCTG GTGCGTACCC GTGTCGACGA AGTGTCCAGC
TCCGGCCGCA ACACCCAGGG CGTGACCCTG ATCAAGCTGG CCAAGGACGA GACTCTGGTC
GGCCTGGAGC GTGTGCAGGA GCCGACGCCG GTGGAAGAGG ACGAACTGCT TGAGGGCGAA
GAGGGCGCTG AAGTCGCCGA CAGCGCCGAT GCGCCGATCG TCGACGCCGA GGAAGGCAGC
GAGGAGTAA
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| Protein sequence | MGELAKEILP VNIEDELKQS YLDYAMSVIV GRALPDARDG LKPVHRRVLY AMSELGNDWN
KPYKKSARVV GDVIGKYHPH GDTAVYDTIV RMAQDFSLRY LLVDGQGNFG SVDGDNAAAM
RYTEVRMTKL AHELLADLDK ETVDWVPNYD GTEQIPAVMP TKVPNLLVNG SSGIAVGMAT
NIPPHNLSEV IDGCLALIDN ADLTVDDLMQ YIPGPDFPTA GIINGRAGII EAYRTGRGRI
YIRARVEVED IDKVGGRQQL VVTELPYQLN KARLIEKIAE LVKEKKIEGI TELRDESDKD
GMRVVIELRR GEVPDVVLNN LYAQTQMQSV FGINVVALVD GQPKTMNLKD MLEVFVRHRR
EVVTRRTVYE LRKARERGHI LEGQAVALSN IDPVIELIKA SPTPAEAKER LIATAWESSA
VEAMVERAGA DSCRPEGLDP QYGLREGKYY LSPEQAQAIL ELRLHRLTGL EHEKLLAEYQ
EILSLIGELI RILTSPERLM EVIREELEKV KAEFGDARRT EIIASRQDLT IADLITEEER
VVTISHGGYA KSQPLAAYEA QRRGGKGKSA TGVKDEDYVE HLLVANSHAT LLLFSSKGKV
YWLRTFEIPE ASRAARGRPL VNLLPLDEGE RITAMLQIDL EALQQSAGAD EDLDDEGLVI
EGEATEVVEA EEVEEVEGET PELVAEPTGA FIFMATAFGT VKKTPLVQFS RPRSAGLIAL
KLEEGDTLIA AAITDGAKEV MLFSDAGKVL RFAESKVRTM GRTARGVRGM RLGKDQRLIS
MLIPESGAQI LTASERGFGK RTGLGKFPRR GRGGQGVIAM VTSERNGKLV GAIQVQDGEE
IMLISDQGTL VRTRVDEVSS SGRNTQGVTL IKLAKDETLV GLERVQEPTP VEEDELLEGE
EGAEVADSAD APIVDAEEGS EE
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