Gene Pmen_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1836 
Symbol 
ID5109966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2023038 
End bp2023391 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content64% 
IMG OID640503068 
Producthypothetical protein 
Protein accessionYP_001187332 
Protein GI146306867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.118115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.50013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA ATTTCCTCTC CCTGATCAGC CATCTGCTGA TGGTCTGCCT GTTCGTCGCC 
ACCCTGCCCG CCCAGGCCAG CATGATCGGC ACGCAGGACG TTCTCGCCGA ACAGAGCCTC
GCCGCCGACC GTGCCAAGAT CGATGACTTC CTGGCCCGCG ACAACGTGCA GCAAGCCCTG
CAGAGCATGG ACGTGGCGCC GGACCTGGCG CGCCAGCGCG TCGATGCCAT GACGCCTGCG
GAAATCGCCA GCCTGTCCCA GCGCATCGAC AGCATGCCGG TCGCCGGCGC TCTGAGCGGC
ACCGACTTCG TCATCATCCT GCTGGTGGCG ATTCTGGTCG TGCTGATCCT CTGA
 
Protein sequence
MNKNFLSLIS HLLMVCLFVA TLPAQASMIG TQDVLAEQSL AADRAKIDDF LARDNVQQAL 
QSMDVAPDLA RQRVDAMTPA EIASLSQRID SMPVAGALSG TDFVIILLVA ILVVLIL