| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1835 |
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| Symbol | |
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| ID | 5109965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2022322 |
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| End bp | 2022990 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503067 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_001187331 |
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| Protein GI | 146306866 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.225419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.414571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACAGCC ACCCACTGTC CCTTCATGAG CAGGATGCAA GTGTGAGCCA ATTCTTCCAG
GTCCACCCGG AGAACCCCCA GGCGCGCCTG ATAAAACAGG CCGTGGAAAT CATTCGCAGT
GGCGGGGTGG TGGTCTATCC GACCGATTCC TCCTACGCCC TGGGTTGCGC CATCGGCGAC
AAGAATGCGG TCGAGCGCAT TCGTCGCCTG CGTCAGCTCG ACGACAAGCA CAACTTCACC
CTGGTCTGCC GCGACCTGTC GCAGATCGGC CTGTTCGCCA AGGTGGACAC CGCCGCCTTC
CGTCTGCTGA AGAATCACAC GCCGGGCCCC TACACCTTCA TCCTCAATGC CACCCGTGAA
GTGCCGCGCA TGCTGCTGCA TCCCAAGCGC CGCACCATCG GCCTGCGCGT GCCCAGCCAT
CCGATCGCCC TGGCATTGCT CGAGCAGCTC GGCGAGCCGC TGATGAGCGT CAGCCTGATT
CTGCCGGGTG ACGAGCTGCC GATGTCCGAC CCCTACGAGA TGCGCCAGAT ACTCGAACAT
CAGGTCGAGC TGATCATCGA CGGCGGCTTC GGCGGCCTGG AAGCCTCCAC CGTGGTCAAC
CTGGCCGACG ATACGCCGGA GATCCTGCGG GTGGGCTGTG GCGATCCGTC GCCATTCGTC
GATCTGTAA
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| Protein sequence | MHSHPLSLHE QDASVSQFFQ VHPENPQARL IKQAVEIIRS GGVVVYPTDS SYALGCAIGD
KNAVERIRRL RQLDDKHNFT LVCRDLSQIG LFAKVDTAAF RLLKNHTPGP YTFILNATRE
VPRMLLHPKR RTIGLRVPSH PIALALLEQL GEPLMSVSLI LPGDELPMSD PYEMRQILEH
QVELIIDGGF GGLEASTVVN LADDTPEILR VGCGDPSPFV DL
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