Gene Pmen_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1833 
Symbol 
ID5109963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2021067 
End bp2021366 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content68% 
IMG OID640503065 
ProductYciI-like protein 
Protein accessionYP_001187329 
Protein GI146306864 
COG category[S] Function unknown 
COG ID[COG2350] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.855778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.363784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACG CCATCATCGC CACCGACGTC GAAAACTCCC TGGACCATCG CCTGGCTGCC 
CGCCCCGCCC ACCTGGCCCG CCTCGAGCAG CTCAAGCAGG AAGGACGTCT GGTTCTGGCC
GGCCCACACC CGGCCATCGA CAGCAACGAC CCGGGCCCGG CGGGCTTCAG CGGCAGCCTG
ATCGTCGCCG AGTTCGACTC GCTGGAGGCC GCACAGAGCT GGGCCGACGC CGACCCCTAC
CGCGCCGCCG GTGTCTACGC CAACGTAGTG GTCAAACCGT TCAAGAAAGT GCTGCCCTGA
 
Protein sequence
MLYAIIATDV ENSLDHRLAA RPAHLARLEQ LKQEGRLVLA GPHPAIDSND PGPAGFSGSL 
IVAEFDSLEA AQSWADADPY RAAGVYANVV VKPFKKVLP