Gene Pmen_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1827 
Symbol 
ID5109957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2017001 
End bp2017372 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content66% 
IMG OID640503059 
Producthypothetical protein 
Protein accessionYP_001187323 
Protein GI146306858 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.889307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CCAATCCCTG CCTCACGTGC GGCGCCTGCT GCGCGTTCTT TCGTGTGTCC 
TTCTTCTGGG GCGAATGCCA ATCCGCGGGC GGTAGCGTGC CGGACGAGCA GGTCATCCAA
ATCAGCCCTC ACTACGTCGC CATGCGCGGC ACCGAAAGCA AGCCGGCGCG CTGTACCCAG
CTGCTGGGCG AGGTTGGCTG TGGTGTTCGT TGCACCATGT ACGAGCAGCG TTCGAGCAGT
TGCCGTGAAT TCGAGGCTTC CTGGGAGAAC GGCGTACACA ACCCGCGCTG CGACGACGCG
CGCAAGGCGC ACGGCCTGCC GCCGCTGACG CCGCCCGTAC AGCCGGTGGT GTCGCCGGAC
CGCGTCGCCT GA
 
Protein sequence
MSEANPCLTC GACCAFFRVS FFWGECQSAG GSVPDEQVIQ ISPHYVAMRG TESKPARCTQ 
LLGEVGCGVR CTMYEQRSSS CREFEASWEN GVHNPRCDDA RKAHGLPPLT PPVQPVVSPD
RVA