Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1827 |
Symbol | |
ID | 5109957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2017001 |
End bp | 2017372 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503059 |
Product | hypothetical protein |
Protein accession | YP_001187323 |
Protein GI | 146306858 |
COG category | [R] General function prediction only |
COG ID | [COG0727] Predicted Fe-S-cluster oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.889307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGAAG CCAATCCCTG CCTCACGTGC GGCGCCTGCT GCGCGTTCTT TCGTGTGTCC TTCTTCTGGG GCGAATGCCA ATCCGCGGGC GGTAGCGTGC CGGACGAGCA GGTCATCCAA ATCAGCCCTC ACTACGTCGC CATGCGCGGC ACCGAAAGCA AGCCGGCGCG CTGTACCCAG CTGCTGGGCG AGGTTGGCTG TGGTGTTCGT TGCACCATGT ACGAGCAGCG TTCGAGCAGT TGCCGTGAAT TCGAGGCTTC CTGGGAGAAC GGCGTACACA ACCCGCGCTG CGACGACGCG CGCAAGGCGC ACGGCCTGCC GCCGCTGACG CCGCCCGTAC AGCCGGTGGT GTCGCCGGAC CGCGTCGCCT GA
|
Protein sequence | MSEANPCLTC GACCAFFRVS FFWGECQSAG GSVPDEQVIQ ISPHYVAMRG TESKPARCTQ LLGEVGCGVR CTMYEQRSSS CREFEASWEN GVHNPRCDDA RKAHGLPPLT PPVQPVVSPD RVA
|
| |