| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1825 |
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| Symbol | |
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| ID | 5109955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2014224 |
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| End bp | 2015237 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503057 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001187321 |
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| Protein GI | 146306856 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.86634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.723243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA GAACCACATC CTCCAACTGG GCATTGGCCA TCGTGCAGGC ACTGGAGCTG
GGCGGCGTCG ACTGCGTCGG CCTGTTCGCC GAGCTGGGTC TGGACTATGC CGCGCTGAAC
GATCCCGATG CACGCTTTCC GCAGGACGGC ATGACCCGCG TGTGGCAGCA CGCCGTGGCG
CTGTCGGGCA ATCCGGCGAT CGGGCTGAAC ATGGCGCAGG TGGTGCGCCC GGCGTCCTTC
CATGTCGTCG GTTATGCGCT GATGTCCAGT CGCAACCTGC GCGAGGGCTT CACCCGCCTG
GTGCGCTATC AGCGCATCAT CGGCGAGGGG GCGGACCTGA ACCTGCTGCC GCAGCCCGAT
GGCTATGCCC TGACCCTGGC CATTCACGGC GACCGCCTGC CGCCCGCGCG GCAGAGCGCC
GAGGCGTCCC TGGCCTACTG CCTGGCATTC TGTCGCTGGC TCACCGGTAA GCCCATTCGC
CCGCGGGAGA TCCGCTTCCA GGGGCCGCCG CCGGCGGACC TCGGGCCTTA CCAGCAGGTC
TTCCAGGCCC CGCTCAGGTT CAATGCCGAG CACTATGGCC TGATTTTCGA GCGCAGCGAT
GTCGAGGCGC AGCTGCCCAG CGCCAACGAG GCCCTGGCCC AGCTGCACGA TCGTTTCGCC
GGTGATTACC TGGCGCGCTT TTCCGGCAGC CGCGTCACCC ACCAGGCGCG TCAGGTGCTG
TGTCGCCTGC TGCCGCAGGG CGAGCCGCGG CGCGAGACGG TGGCGCAGGC ACTGCATCTG
TCGCAGCGCA CCCTGCAGCG CCGTCTGCAG GAGGAGGGCA CCAGCTATCA GCAACTGCTC
GACGACACCC GCCGCGACCT TGCCGAGCAG TATCTCGGCC AGGTCGATCT GACGCTGCTG
GAGGTCGCCT ATCTGCTCGG GTTCGCCGAC CCGAGCAACT TCTTCCGCGC CTTCCGCCGC
TGGTTCGGCG AAACGCCGGG GGAATACCGC GCGCAGCGCG GGTTCGCCTC CTGA
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| Protein sequence | MSERTTSSNW ALAIVQALEL GGVDCVGLFA ELGLDYAALN DPDARFPQDG MTRVWQHAVA
LSGNPAIGLN MAQVVRPASF HVVGYALMSS RNLREGFTRL VRYQRIIGEG ADLNLLPQPD
GYALTLAIHG DRLPPARQSA EASLAYCLAF CRWLTGKPIR PREIRFQGPP PADLGPYQQV
FQAPLRFNAE HYGLIFERSD VEAQLPSANE ALAQLHDRFA GDYLARFSGS RVTHQARQVL
CRLLPQGEPR RETVAQALHL SQRTLQRRLQ EEGTSYQQLL DDTRRDLAEQ YLGQVDLTLL
EVAYLLGFAD PSNFFRAFRR WFGETPGEYR AQRGFAS
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