Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1821 |
Symbol | |
ID | 5109951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2010212 |
End bp | 2011033 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503053 |
Product | metallophosphoesterase |
Protein accession | YP_001187317 |
Protein GI | 146306852 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.177356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.924428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCG CCCAGCTCGC CAAGCCCACC CGCAAGCAAC GTGTCCGCAC CCTGTGGATC TCCGACGTGC ACCTCGGCAC CCGCGACTGT CAGGCCGAGC ACCTGGCGGC CTTTCTCAAG CGCTACCACG CCGATCGCAT CTACCTGGTG GGTGACATCA TCGACGGCTG GAAGCTGCGC GGCGGCATCT ACTGGCCGCA GGCGCACACC AACGTGATCC GTCGTCTGCT GACCATGAGC AAGCGCGGCA CCGAGGTGAT CTACGTCACC GGCAACCACG ACGAGTTCCT GCGCCGCTAT TCCAGCCTGA TGCTGGGCAA CATCCAGCTG GTCGACGAGG CCGAGCACGT CACCGTCGAC GGCCGCCGCC TGCTGGTGAT CCATGGCGAC CAGTTCGACG TGATCACCCG CTACCACCGC TGGCTGGCCT TTCTCGGCGA TTCGGCCTAC GAATTCACCC TGACCCTCAA CCGCTGGCTC AACCACTGGC GCAGCCGCTG GGGCTACGGC TACTGGTCGC TGTCGGCCTA CCTCAAGCAT AAGGTCAAGA CCGCGGTGAA CTTCATCAGC GACTTCGAGG AGGCCATCGC CCACGAATGC GTCAAGCGCG GCCTGCAGGG CGTCGTGTGC GGTCACATCC ACCACGCCGA GATCCGCCAG GTCGGCGGGG TGGAGTACAT GAACTGCGGC GACTGGGTGG AGTCCTGCAC GGCGCTGATC GAGCACTGGG ACGGGCAGAT CGAGCTGTAC CGCCTGGCCG AGGCGCAGGC GCGCCTGGTC GGTGAGGAAC AGGCCGCTGC CGTGCTCGAG ACCGGCGCAT GA
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Protein sequence | MTSAQLAKPT RKQRVRTLWI SDVHLGTRDC QAEHLAAFLK RYHADRIYLV GDIIDGWKLR GGIYWPQAHT NVIRRLLTMS KRGTEVIYVT GNHDEFLRRY SSLMLGNIQL VDEAEHVTVD GRRLLVIHGD QFDVITRYHR WLAFLGDSAY EFTLTLNRWL NHWRSRWGYG YWSLSAYLKH KVKTAVNFIS DFEEAIAHEC VKRGLQGVVC GHIHHAEIRQ VGGVEYMNCG DWVESCTALI EHWDGQIELY RLAEAQARLV GEEQAAAVLE TGA
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