Gene Pmen_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1821 
Symbol 
ID5109951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2010212 
End bp2011033 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content66% 
IMG OID640503053 
Productmetallophosphoesterase 
Protein accessionYP_001187317 
Protein GI146306852 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.177356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.924428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG CCCAGCTCGC CAAGCCCACC CGCAAGCAAC GTGTCCGCAC CCTGTGGATC 
TCCGACGTGC ACCTCGGCAC CCGCGACTGT CAGGCCGAGC ACCTGGCGGC CTTTCTCAAG
CGCTACCACG CCGATCGCAT CTACCTGGTG GGTGACATCA TCGACGGCTG GAAGCTGCGC
GGCGGCATCT ACTGGCCGCA GGCGCACACC AACGTGATCC GTCGTCTGCT GACCATGAGC
AAGCGCGGCA CCGAGGTGAT CTACGTCACC GGCAACCACG ACGAGTTCCT GCGCCGCTAT
TCCAGCCTGA TGCTGGGCAA CATCCAGCTG GTCGACGAGG CCGAGCACGT CACCGTCGAC
GGCCGCCGCC TGCTGGTGAT CCATGGCGAC CAGTTCGACG TGATCACCCG CTACCACCGC
TGGCTGGCCT TTCTCGGCGA TTCGGCCTAC GAATTCACCC TGACCCTCAA CCGCTGGCTC
AACCACTGGC GCAGCCGCTG GGGCTACGGC TACTGGTCGC TGTCGGCCTA CCTCAAGCAT
AAGGTCAAGA CCGCGGTGAA CTTCATCAGC GACTTCGAGG AGGCCATCGC CCACGAATGC
GTCAAGCGCG GCCTGCAGGG CGTCGTGTGC GGTCACATCC ACCACGCCGA GATCCGCCAG
GTCGGCGGGG TGGAGTACAT GAACTGCGGC GACTGGGTGG AGTCCTGCAC GGCGCTGATC
GAGCACTGGG ACGGGCAGAT CGAGCTGTAC CGCCTGGCCG AGGCGCAGGC GCGCCTGGTC
GGTGAGGAAC AGGCCGCTGC CGTGCTCGAG ACCGGCGCAT GA
 
Protein sequence
MTSAQLAKPT RKQRVRTLWI SDVHLGTRDC QAEHLAAFLK RYHADRIYLV GDIIDGWKLR 
GGIYWPQAHT NVIRRLLTMS KRGTEVIYVT GNHDEFLRRY SSLMLGNIQL VDEAEHVTVD
GRRLLVIHGD QFDVITRYHR WLAFLGDSAY EFTLTLNRWL NHWRSRWGYG YWSLSAYLKH
KVKTAVNFIS DFEEAIAHEC VKRGLQGVVC GHIHHAEIRQ VGGVEYMNCG DWVESCTALI
EHWDGQIELY RLAEAQARLV GEEQAAAVLE TGA