| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1820 |
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| Symbol | |
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| ID | 5109950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2009330 |
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| End bp | 2010076 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640503052 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001187316 |
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| Protein GI | 146306851 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.167781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.742207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCCGA TCCTGTCATT GCGTCATTAC AGCCACGAAG TGCTCTGCCA TAGCCACGAC
CACGCCCAGC TGGTGTTCGG CCTGGCCGGC GAGCTGCAGT TCGAGGTAGC CGATCAGGGC
AGCCGGGTAC TGCGCCACCA GGTGGCCGTG GTACCGGCCG AGGCTCGCCA TGCCTGCGGC
AGCCCGCGCG GCAGTCAGTG CCTGGTGCTG GACCTGCCGG CCAACGACTG GCTCGAACGG
CAACTCGGCC ACCATGCCGA CAGTATCCAG CGCCTGCTGG ACAAGCCGCG GGCGATGCAG
CTCGATCCCG TTCAGGGCCA GCTGCTCAGC TGGCTCGCCA GCAGCCCGAT CAACGACCCG
GTGATCGCCA ACCAGGGCGC GGCGCTGCTG CTCGGCAGCC TGGCCTGCGG CGGGCAGCAC
GTGCAGCCCG GCGGCCTGCC GCTGGCGGCG CTGGACAGCT ATATCGAGCA GCATGCCGCG
CGCCCTCTGC AGGTCGCCGA CCTGGCCCGT CTGGCCGGCC TTTCGGTGGC GCGCTTTCAC
GCGCGCTTTC TGGCCGAGAC CGGGCGCACG CCCATGGAGC ATCTGCGCCT GCAGCGCCTG
CGCCTGGCCG AACGCCTGCT GCTGGACAGT GACCTGCCCG TCGGCGAGGT GGCGGCGCGG
GTCGGCTACG CCTCGCAGAG CGCCTTTACC GCCGCCCTCT CCCGCCACCT GGGCATGACC
CCGCGACAGT TGCGCCGCGG CCGCTAG
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| Protein sequence | MPPILSLRHY SHEVLCHSHD HAQLVFGLAG ELQFEVADQG SRVLRHQVAV VPAEARHACG
SPRGSQCLVL DLPANDWLER QLGHHADSIQ RLLDKPRAMQ LDPVQGQLLS WLASSPINDP
VIANQGAALL LGSLACGGQH VQPGGLPLAA LDSYIEQHAA RPLQVADLAR LAGLSVARFH
ARFLAETGRT PMEHLRLQRL RLAERLLLDS DLPVGEVAAR VGYASQSAFT AALSRHLGMT
PRQLRRGR
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