Gene Pmen_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1819 
Symbol 
ID5109949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2008778 
End bp2009113 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content65% 
IMG OID640503051 
Productexport-related chaperone CsaA 
Protein accessionYP_001187315 
Protein GI146306850 
COG category[R] General function prediction only 
COG ID[COG0073] EMAP domain 
TIGRFAM ID[TIGR02222] export-related chaperone CsaA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.106603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.690755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCA TCGAATGGCA GGATTTCGAG AAGGTGGAGC TGCGCGTCGG CACCATTCGC 
AGCGCTCGTC CCAATGAGAA GGCCGTGAAG CCGGCCTACG TGCTGGAGGT GGACCTGGGC
GAGCTGGGCC TCAAGACTTC CAGCGCGCAG CTCACCGCTC ACTACAGCTG CGACGAACTG
CCGGGCCGCC AGGTGCTGTG CGTGTGCAAC TTCGCGCCCA AGCGCATCGC CGGCGTACGT
TCGGAAATCC TGGTGACGGG GGTCTACGAC AGCGAACAGC GCGTCGTGCT CGCCGGTTTC
GACAGGCCGC TACCCAACGG GGCGCGCCTG GCATGA
 
Protein sequence
MQTIEWQDFE KVELRVGTIR SARPNEKAVK PAYVLEVDLG ELGLKTSSAQ LTAHYSCDEL 
PGRQVLCVCN FAPKRIAGVR SEILVTGVYD SEQRVVLAGF DRPLPNGARL A