| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1816 |
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| Symbol | |
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| ID | 5109946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2005333 |
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| End bp | 2007519 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503048 |
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| Product | patatin |
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| Protein accession | YP_001187312 |
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| Protein GI | 146306847 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCC TGCTCTGTTC GCTGATCTGC CTGCTCGCCC TGTCCAGCCT GCCCACCATC
GCCAGCGAGC GCGTCGGCCT GGTGCTCTCT GGTGGCGCCG CCCGCGGCCT GGCACATATC
GGCGTGCTCA AGGCCCTGGA GGAACAGGGT CTGCGCATCG ACGCCATCGC CGGCACCAGC
ATGGGCGCCA TCGTCGGCGG TCTGTACGCG GCCGGCTATT CGGTGGCGGA ACTGGAGCGC
CTGGCCCTGG AACTGGACTG GCAACAGGCC CTGTCGGACT CGCCGCCACG TGAGGACATA
CCCTTTCGCC GCAAGCAGGA CGACCGCGAT TTCCTGGTCA AGCAGAAGCT CAGCTTCCGC
GATGATGGCA GCCTCGGACT GCCCCTGGGG GTCATCCAGG GGCAGAACCT GGCGCTGCTG
CTGGAAAGCC TGATGGTGCA TCGCAGCGCG ACCCGCGACT TCGATCAGTT GCCCATCCCC
TACCGCGCCG TGGCCACCGA TGTGGTTACC GGCGAGCAGG TGATCATGCG CACCGGCCAC
CTGCCCCAGG TGATGCGCGC CAGCATGTCG ATCCCCGCGG TATTCGCCCC GGTGGAGCTG
GACGGCCGTC TGCTGGTGGA CGGCGGCATG GTCAACAACG TGCCGATCGA CGTGGCGCGG
CAGATGGGGG TGGATCGGGT CATAGTGGTC GACCTCGGCA TGCCGCTGAA ACCAGCCAAG
GACCTGCTCA CCGTGGTCGA CGTGATGAAC CAGTCGATCA ATCTGATGAT GCGCAAGAAC
TCCGAAGCCC AGCTCGGCAC GCTGGAGGCC GACGATGTGC TGATCCAGCC GCCGCTGGCG
GGCTTCGGCG TGGCCGATTT CGACCGTGCC GAGCAGATGA TCGAGGCCGG CTACCGGGCC
ACGCAGATCC AGGCCGAGCG TCTGGCGCGC CTGCAGACCA GCACAGCCGG CAACCCGGCG
CTGGCCATGG CGCGCTCGCG TGAGCAGCGC ACGCCGGTGA TCCGGGAAAT CCGCGTGGAG
AACGACTCCA AGGTCGGGGA TGCGGTGATC CGCCGGCACA TCCGTCAGCC ACTGGACGAG
CCGCTGGATG TGGAGCGACT GCAGAAAGAC ATGGGCACGC TGTACGGCCT GGATTACTTC
GAGCGCGTGC AGTATCGCGT GGCGCCGCTG GATGAACGCG GCAGTGCGCT GGTGATCGAT
GCGCGCGGCA AGCGCACCGG CACCGACTAT CTGCGCCTGG GCCTGAACCT GTCCGATGAC
ATGCGCGGCG ACAGCACTTT CAACATTGGC GCCAGTTACC GCGTCAACGG CATCAACGAA
CTGGGAGCCG AATGGCTGAC TCGCCTGCAG CTCGGCGACC GTCAGGAGCT GTACAGCGAG
TTCTATCAGC CGCTGGATGC CGGTTCGCGC TACTTCGTCG CGCCCTATCT GTTCGGTGAG
GCGCAGAACA TCGAAGCCAT AGTGGACAAC GACCCCATCG CCGAGTACCG CCTGGAGCGC
TACGGCTATG GCCTCAACCT CGGCCGGCAG ATCGCCAACA ACGGCGAGAT CCGCTTCGGC
ATCGGCCAGG CCTGGGGCGA GGCGGACGTG CGCGTGGGCG AGCGCGATCT GCCCAGCTTC
AGTTTCAGCG AGGGCTATTA CGAGCTGAAG TATTCCTTCG ACACCCTCGA CAACCTCGAC
TTCCCACGCC GCGGTGAAGA CATCGGCCTG TTGCTGCGCC AGTACGACAG TGGCCTGGGT
GCGGACGACG AGTACCGCCA ATGGCAGCTG GAACTGAGCA AGGTGTTCAG CGTCGAGGCC
AATACCTGGG TGCTGGGCGG TCGCTACGGA CGCACCCTGG ACGAGGCGGA TGTCGTCACC
TCGGGCTTCG TCCTCGGCGG TGCGCAGGAG CTGTCAGGCT TTCGCCAGGA CGCGCTGAGC
GGCCAGAACG TGGCCCTGGC GCGAATGGTC TATTACCGCC GACTGACCCA GCGTTCCCTG
CTGCCGCTGG ACTTCCCCCT GTACCTGGGC ATGTCGCTGG AACGCGGCCG GGCGTGGAAC
AACGACAATG CCTTCGACAG CGGCTACATC AACGCGGCGA GCATCTTCCT CGGCCTGGAC
ACGCCGCTGG GACCGCTGAA CTTCAGCTAT GGCTTCAACG ACGAGCGGGA AAAGGCACTG
TATCTCAACC TCGGCAAGAG TTTCTGA
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| Protein sequence | MRRLLCSLIC LLALSSLPTI ASERVGLVLS GGAARGLAHI GVLKALEEQG LRIDAIAGTS
MGAIVGGLYA AGYSVAELER LALELDWQQA LSDSPPREDI PFRRKQDDRD FLVKQKLSFR
DDGSLGLPLG VIQGQNLALL LESLMVHRSA TRDFDQLPIP YRAVATDVVT GEQVIMRTGH
LPQVMRASMS IPAVFAPVEL DGRLLVDGGM VNNVPIDVAR QMGVDRVIVV DLGMPLKPAK
DLLTVVDVMN QSINLMMRKN SEAQLGTLEA DDVLIQPPLA GFGVADFDRA EQMIEAGYRA
TQIQAERLAR LQTSTAGNPA LAMARSREQR TPVIREIRVE NDSKVGDAVI RRHIRQPLDE
PLDVERLQKD MGTLYGLDYF ERVQYRVAPL DERGSALVID ARGKRTGTDY LRLGLNLSDD
MRGDSTFNIG ASYRVNGINE LGAEWLTRLQ LGDRQELYSE FYQPLDAGSR YFVAPYLFGE
AQNIEAIVDN DPIAEYRLER YGYGLNLGRQ IANNGEIRFG IGQAWGEADV RVGERDLPSF
SFSEGYYELK YSFDTLDNLD FPRRGEDIGL LLRQYDSGLG ADDEYRQWQL ELSKVFSVEA
NTWVLGGRYG RTLDEADVVT SGFVLGGAQE LSGFRQDALS GQNVALARMV YYRRLTQRSL
LPLDFPLYLG MSLERGRAWN NDNAFDSGYI NAASIFLGLD TPLGPLNFSY GFNDEREKAL
YLNLGKSF
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