Gene Pmen_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1814 
Symbol 
ID5109944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2002434 
End bp2002865 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID640503046 
ProductMarR family transcriptional regulator 
Protein accessionYP_001187310 
Protein GI146306845 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.571932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACC CCGATCAACA CCGCTTCGCC ATGCAAGTCG CCCAACTCTC CCGTGCCTGG 
CGCTCCGAAC TCGACCGGCG CCTGGTCGGC CTCGGCCTGT CGCAGGCGCG CTGGCTGGTG
CTGCTGCACC TGGCGCGATT CACCGAGATG CCGACCCAGC GCGAATTGGC GCAGAGCGTG
GGGGTCGAAG GACCTACCCT GGCGCGGTTG CTCGACAGTC TCGAGACTCA GGGGCTGGTG
ACGCGCGTCG CCGTGCCTGA GGACCGCCGG GCCAAGAAGA TCGCCCTGCA GCCCAAGGCG
CAGCCTCTGA TCGAGAAGAT CGAGGCGATC TCCACCCAGC TGCGTCAGGA AGTGTTCGCC
GGCATCGACG AGGAAGATCT GCGGCGCTGT CAGCAGGTAC ACGCCCGGGT GTTGGGCAAC
CTGCTGAAGT AA
 
Protein sequence
MSYPDQHRFA MQVAQLSRAW RSELDRRLVG LGLSQARWLV LLHLARFTEM PTQRELAQSV 
GVEGPTLARL LDSLETQGLV TRVAVPEDRR AKKIALQPKA QPLIEKIEAI STQLRQEVFA
GIDEEDLRRC QQVHARVLGN LLK