| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1809 |
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| Symbol | |
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| ID | 5109939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1996869 |
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| End bp | 1997549 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503041 |
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| Product | periplasmic protein-like protein |
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| Protein accession | YP_001187305 |
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| Protein GI | 146306840 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3672] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.92254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGGC TGCGCGTTCA GGGATGGCGG TTGCGGCTGC TGATCCTGTG GATCGGCGGC
GGGCTGCTGG TCGCGCTGGC AGCAGCCGAT TGGGACTTCG CCCTGATCGT GAAGAACGCG
GAAAACCGTT ACGGCAACCT CGGGCCGGCA CGCAAGCGCA TTCTCGACTG GCAAGACCTG
ATCAAGAGCA GCGCCAGCCT GAGCGAGGCG GACAAGCTCA ACGAGGTCAA TCGCTTCTTC
AACCGTACCA TCCGCTTCGT CGACGACATT CAGCTCTGGC GCGAGAACGA CTACTGGGCC
ACCCCCGTGG AGATGCTGGT CAAGGGCGCC GGCGATTGCG AGGACTACTC CATCGCCAAG
TACTTCACCC TGCGTCGCCT CGGCATTCCC AGCGAGAAGC TGCGCATCAC CTACGTCAAG
GCACTCAACT ACAACCAGGC ACACATGGTG CTGACCTACT ACGCCAGCCC CACCGCCGAG
CCACTGGTGC TGGACAACCT GATCAACGAC ATTCGCCCTG CCTCGCAACG CAAGGACCTG
CTGCCGGTGT ACGCCTTCAA TGCCGAAGGG CTCTATCTGG CGGGTTCCAA CACGCGCAAG
AGCGATACCA AGAAGCTCTC CCGCTGGCAG GACATCCTGA AAAAAATGCG TGCGGAGGGC
TTCGCCATTG GCGAAGGCTA A
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| Protein sequence | MRRLRVQGWR LRLLILWIGG GLLVALAAAD WDFALIVKNA ENRYGNLGPA RKRILDWQDL
IKSSASLSEA DKLNEVNRFF NRTIRFVDDI QLWRENDYWA TPVEMLVKGA GDCEDYSIAK
YFTLRRLGIP SEKLRITYVK ALNYNQAHMV LTYYASPTAE PLVLDNLIND IRPASQRKDL
LPVYAFNAEG LYLAGSNTRK SDTKKLSRWQ DILKKMRAEG FAIGEG
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