Gene Pmen_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1807 
Symbol 
ID5109937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1994334 
End bp1994675 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content64% 
IMG OID640503039 
Producthypothetical protein 
Protein accessionYP_001187303 
Protein GI146306838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.250952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTATG TACAGCGCGA CGCCGCGGGG CGGTTGCTGC GGGTCGAATA CGAGCCCTTC 
GAGGGAATGA CGGAGAATCT GGCAGTCGAG AGCGAGGAGC TGCACACCTG GCTGACCGCC
AAGGAAGAGG TCAAGGCGCG TCTGGACAGC CTCAAGCAGT CCGACCTGGA GCTGGTTCGC
GTACTGGAAG ACGTGGTCAG CGTGCTGGTC GAGCGCGGCG TGATCCGTTA CACCGACCTG
CCCGAAGCCG CGCGGCAGAA GCTCGATCAG CGAGCCATCG CTCGTGCCGA GATCGAGGGC
CTCAGCGGTT TGCTTGGCGA CGACGAACAC AACCTGGTGT GA
 
Protein sequence
MVYVQRDAAG RLLRVEYEPF EGMTENLAVE SEELHTWLTA KEEVKARLDS LKQSDLELVR 
VLEDVVSVLV ERGVIRYTDL PEAARQKLDQ RAIARAEIEG LSGLLGDDEH NLV