| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1799 |
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| Symbol | |
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| ID | 5109929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1975544 |
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| End bp | 1976443 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503031 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187295 |
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| Protein GI | 146306830 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0309251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.330495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTC CTACCTCGCT ACCCGATCTC AAGCTGCTGC GCATCTTCGC CTGCGTGGTG
CGCCACCAGG GCTTTGCCGC CGCGCAGCAG GAACTGAACC TGTCCACCTC GGCCATCAGC
ACCTACATGA GTCAGCTGGA GACCCAGCTC GGCATCGTGC TTTGTCACCG TGGGCGAGGC
GGCTTCAGCC TGACCAGCAA GGGCGAGCTG TTTCATCAGG AAACCCTGCG CCTGCTCGGC
GAACTGGAGG GTTTCGAGCG CTACTCCGCC GCGCTCAAGG GCGAGTTGCG CGGTACCCTC
AATCTCGGCG TGCTGGATTC CACGGTGAGC GATACGGCGC TGCCCCTGGC CGAGGTGATC
GGCGCCTACA GCCAGGAGTA CCCGGGGGTG CATTTGCACC TGTCGGTGAT GAGCCCGTAC
GAGCTGCAGC TGGCGGTGCT GGACAACCGC CTGGATCTGG CCATCGGCGC GTTCTCCACG
CGCATGAACG GCCTGGTCTA CCAGCCGCTG TACCGCGAAC AGCACTGGCT GTACTGCAGC
GAGCGGCATT CGCTGTTCGA GCAGCGGCGC ATTCCAGCCG AGGTGATCAC CCAGCAGCGC
ATGGTCGGCC GCGGCTACTG GAGCCAGGCC GAACTGGCGC GGCACGGCTT CAAGCACAGC
GCAGCGACGG TAGAGTCGAT GGAAGCGCAG CTAATTCTGG TGCTGTCCGG CGCCTATATC
GGCTACCTGC CGGAGCACTA CGCCCAGCCC TGGGTGGAGC AAAAGCGGCT CAAGGTGCTG
CTGCCCACCA CCTTCGGTTA CCAGGCGCCG TTCTCCCTGA TCCTGCGTCG TGGTCGCTCG
CGCGAGCCGT TGATCCAGAC CTTCCGCGAT CTTTTGAAAA ACCAGCTCAA TCAGATCTGA
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| Protein sequence | MTPPTSLPDL KLLRIFACVV RHQGFAAAQQ ELNLSTSAIS TYMSQLETQL GIVLCHRGRG
GFSLTSKGEL FHQETLRLLG ELEGFERYSA ALKGELRGTL NLGVLDSTVS DTALPLAEVI
GAYSQEYPGV HLHLSVMSPY ELQLAVLDNR LDLAIGAFST RMNGLVYQPL YREQHWLYCS
ERHSLFEQRR IPAEVITQQR MVGRGYWSQA ELARHGFKHS AATVESMEAQ LILVLSGAYI
GYLPEHYAQP WVEQKRLKVL LPTTFGYQAP FSLILRRGRS REPLIQTFRD LLKNQLNQI
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