| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1797 |
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| Symbol | |
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| ID | 5109927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1972770 |
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| End bp | 1973729 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503029 |
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| Product | putative agmatinase |
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| Protein accession | YP_001187293 |
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| Protein GI | 146306828 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.57797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGG TTTTTCATCA GCCCCTGGGC GGCAACGAAA TGCCCCGCTT CGGCGGCATC
GCCACCATGA TGCGCCTGCC CCACATCCAG AGCCCCGAGG AAAAACGCCA GCTCGACGCC
GCCTTCGTCG GCGTGCCGCT GGATATCGGC ACCTCGCTGC GCTCCGGCAC CCGCTTCGGC
CCGCGCGAGA TCCGCGCCCA GTCGGTGATG ATCCGCCCGT ACAACATGGC CACCGGCGCC
GCCCCGTTCG ACTCGCTGAA CGTGGCTGAC ATCGGCGACG TGGCGATCAA CACCTTCAAC
CTGCTCGATG CCGTGCGCAT CATCGAAGAG GCCTACGACG AGATCGTCGA GTACGGCATC
AAGCCGCTGA CCCTAGGTGG CGACCACACC ATCACCCTGC CGATCCTGCG TGCCCTGCAC
AAGAAGTACG GCAAGATCGG CCTGGTGCAC GTCGATGCCC ACGCCGACGT CAACGATCAT
ATGTTCGGCG AGAAGATCGC CCACGGCACC ACCTTCCGCC GCGCCCAGGA AGAAGGCCTG
CTCGACAGCC AACGCGTAGT ACAGATCGGC CTGCGCGCCC AGGGCTACAC CGCAGAGGAC
TTCAACTGGA GCCGCAAGCA GGGCTTTCGC GTGGTGCAGG CCGAAGAGTG CTGGCACCAA
TCGCTGGCGC CGCTGATGGC CGAAGTGCGC GAGAAGGTCG GCGGCGGTCC CGTATACCTG
TCGTTCGACA TCGACGGCAT CGACCCGGCC TGGGCGCCCG GCACCGGCAC GCCGGAGATC
GGCGGGCTGA CCACCATCCA GGCCATGGAG ATCATCCGCG GTTGCCAGGG CCTTGACCTG
ATCGGCGGCG ACCTGGTGGA GGTCTCGCCC CCCTACGACA CCACCGGCAA CACCTCGCTG
CTCGGTGCCA ACTTGCTCTA CGAAATGCTC TGCGTGCTTC CGGGGGTTCA GCGCCGCTGA
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| Protein sequence | MDKVFHQPLG GNEMPRFGGI ATMMRLPHIQ SPEEKRQLDA AFVGVPLDIG TSLRSGTRFG
PREIRAQSVM IRPYNMATGA APFDSLNVAD IGDVAINTFN LLDAVRIIEE AYDEIVEYGI
KPLTLGGDHT ITLPILRALH KKYGKIGLVH VDAHADVNDH MFGEKIAHGT TFRRAQEEGL
LDSQRVVQIG LRAQGYTAED FNWSRKQGFR VVQAEECWHQ SLAPLMAEVR EKVGGGPVYL
SFDIDGIDPA WAPGTGTPEI GGLTTIQAME IIRGCQGLDL IGGDLVEVSP PYDTTGNTSL
LGANLLYEML CVLPGVQRR
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