| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1796 |
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| Symbol | |
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| ID | 5109926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1971297 |
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| End bp | 1972691 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503028 |
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| Product | nucleoside recognition domain-containing protein |
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| Protein accession | YP_001187292 |
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| Protein GI | 146306827 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3314] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.440369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.948878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCG AAGAAACCAT GCCGCTGCTG GATGACCAGC CGCCGGCCGA CACCTCCTAC
AGCTTGCGCC AGTTCCTGAT CTTCCTGATC CCGTCGCTGC TCGGCGTGCT GCTGTTTCTC
ACCCCCATCG TCTATGAGGA GAAGGTCACC ATCGGCCTCG GCGTGATGGC CGACGCGCTC
AAGGCCGCGG TCAGCGATCA GCTGCCGGCC ATCGCCACCG CCCTGCTGCT GCTCTCCGCC
GCCCTCGGCC TGCTCGGCAG CCTGCTCAAG CCCAAGTGGC TGACCGAACG TCGTGCGCTG
AATGACCTGT TCGTGCTGCA TCCGCTGTGG TTGGGCCTGC GCGTGCTCGG CGCGCTGTTC
GCCGCCATGA CCTTCTGGCA GTTCGGCCCG GAATGGATCT GGAATGCCAA CACCGGCGGC
GTGGTGCTCA AGGACCTGGC GCCGGTGCTG ATCACCTTCT TCCTGGTCGC CGGCCTGATC
CTGCCGCTGC TCACCGACTA CGGCCTGATG GAGTTCATCG GTACCATCGT GCGTAATGTG
TTTCGCATGG TCTTCGGCCT GCCCGGGCGC TCGGCCATCG ACGCCATCGC CAGCTGGCTC
GGCTCCGGCA CCGTCGGCGT GCTGATCACC GCCCAGCAGT ACCAGAAGGG CTTTTACAGC
GCGCGAGAGG CGGCGGTGAT CGCCACCAAC TTCTCCATCG CCTCGATCGC CTTCAGCCTG
CTGATCACCA GCTTCATGAA GCTCGATCAC CTGTTCGTGC CCTTCTACCT CACCGTGGTG
GTCGCCGGTC TGGCCGCCGC CATCATCACC CCGCGCATTC CACCGCTGTC GTGGAAGAAG
GATGACTACG TCGCCGGCGT CGGCAAGCAG ATCAAGGAAG ACGTGCCGGC CGGCAACTCG
CTGCTGCGCT GGGGCCTGCT ACAGGCGGTC AGACGCGCCA ACGCCAACCC CTCGCCGGCG
CAGATGGTGA AGATCGGCGT GCACAACGTG GTCGACATCT GGCTGGGTCT GCTGCCGCTG
GTGATGGCCA TCGGCACCGT TTCCCTGGCG ATTGCCGAGT TCACCCCGAT CTTCAACTGG
CTGTCCTACC CCTTCGTGCC CCTGCTCGAA GCCCTGCAGC TGCCGGAAGC GGCCAAGGCG
GCGCCGGCCA TGCTGGTGGG TTTCGCCGAC ATGTTCCTGC CGGCGGTACT GGGCAAGGGC
ATCGAGAGCG AGCTGACCCG CTTCGTGGTG GCCTGCGTGT CGCTGACCCA GCTGATCTAC
ATGTCCGAAG TCGGCGTGCT GATCATCAAG GCCAAGCTGC CGCTGAACCT GCTGGAGCTG
TTCGCCATCT TCATCATCCG TACCCTGATC ACCCTGCCGA TCATCGCGCT GATGGCGCAC
TGGATAGTCG GCTAA
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| Protein sequence | MNREETMPLL DDQPPADTSY SLRQFLIFLI PSLLGVLLFL TPIVYEEKVT IGLGVMADAL
KAAVSDQLPA IATALLLLSA ALGLLGSLLK PKWLTERRAL NDLFVLHPLW LGLRVLGALF
AAMTFWQFGP EWIWNANTGG VVLKDLAPVL ITFFLVAGLI LPLLTDYGLM EFIGTIVRNV
FRMVFGLPGR SAIDAIASWL GSGTVGVLIT AQQYQKGFYS AREAAVIATN FSIASIAFSL
LITSFMKLDH LFVPFYLTVV VAGLAAAIIT PRIPPLSWKK DDYVAGVGKQ IKEDVPAGNS
LLRWGLLQAV RRANANPSPA QMVKIGVHNV VDIWLGLLPL VMAIGTVSLA IAEFTPIFNW
LSYPFVPLLE ALQLPEAAKA APAMLVGFAD MFLPAVLGKG IESELTRFVV ACVSLTQLIY
MSEVGVLIIK AKLPLNLLEL FAIFIIRTLI TLPIIALMAH WIVG
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