| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1794 |
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| Symbol | |
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| ID | 5109924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1968177 |
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| End bp | 1969517 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503026 |
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| Product | permease for cytosine/purine, uracil, thiamine, allantoin |
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| Protein accession | YP_001187290 |
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| Protein GI | 146306825 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family
[TIGR02358] probable hydroxymethylpyrimidine transporter CytX |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGC ATCTCAGCCA GCATTTCGGC CAGGACGGTC TGGCCCCCAC CGACCAAGGC
CATCGCAGCC TCGGCCTCGG CGGCACCACC GCCCTGTGGC TGGGCGCCAA CGTGGTGGTC
ACCACCATTC TCACCGGCAT GTTGCTGGTG CCGGATCTGA AATTTACCCA GGCCATGCTC
ATCGTCCTGA TCGGCTCCGG TATCGGCATT CTGCCGCTGG TGCTGGTCGG TCTGATGGGC
CAGCGCAGCG GCCTGACCAC CATGGTGCTG GCCCGCGGCA GTTATGGCGT GCACGGCGCC
AAGCTGCCGT CGCTAGTCAA CCTGCTGACT CTGCTGGCCT GGAGCTGGAT CCAGGCGCTG
CTGGCCGGCA TGAGCCTGAA CTACGCGGTG GAGCACCTGA CCGGCTATTC CAACCTGGCG
CTGTTCACCA TCCTCTGCGA GACCCTGGTG CTGCTGATCG CCCTGCGCGG CCACCTGGGC
ATCGAGCGCG TCGAGCGCTG GGCCGCCATC GGCATGCTCC TGCTGGCCGG TGCGGTGTTC
TACGTGATGG GGCAGCAGTT CGAGTTCGAA AGCCTTTTGG CCATGCCCAC CGAGCCGCGC
AACGAGATCA CCCCCGGCAT CGCCTTCGAT ATCGTCATCG CCACCGCGTT CTCCTGGATT
CCGCTGGCCG CCGACTACAA CCGCAACTGC CGCAGCCAGG GCGTGGCGGC GGTCGGCACC
TGGGTCGGCT ATGTCGCCGC CACGCTGCTG GCCATGGGCC TGGGCGCCAC GGTGTCGGGC
TTCTCGGTAC TCACCGGCAT GGAGCAGACC TACGACCCGG CGGTGCTGCT GGCCGGTTTC
GGCTTCGGCC TGCCGGCGGC CATCGTGGTC TTCCTCTCGG TGATGACCAC CAACGTCATG
TGCGTGTACA GCGCCTCGCT GTCGTACCTG AACATCAGCC CGAACACCCG CTTCTGGAAG
CCGGCGCTGT GCATCGGCGT GCTGTCGATC CTGGGTTCGC AGATCCCCGG CATTCTCGAC
AACTTCCAGA GCTTTTTGCT GGTGATCGGC AGCGTGTTCA TCCCCGCCTT CGCCGTGCTG
ATCGCCGACT ACTTCCTGAT TCACAAGGGC GAGTACGCGG TGGACGAACT GCTCAGCGAG
GACGGCGGCC GCTATCGCTA CCTGAACGGC TTCAACCCGG CAGCCTTCGT CGCCTACGGC
CTGGGTGCGG CGCTGGCTTA TTACTGGGGC TGGGTCTCGC CGCTGGCCTG GGGCGCCTCG
CTGCCGGTGT TCCTGATCAC CGCTGCCAGC TACGCCGTGC TGCGGCGCTG GGTGCTGGTG
CCGCGGGCGC AACTGGCGTA G
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| Protein sequence | MFKHLSQHFG QDGLAPTDQG HRSLGLGGTT ALWLGANVVV TTILTGMLLV PDLKFTQAML
IVLIGSGIGI LPLVLVGLMG QRSGLTTMVL ARGSYGVHGA KLPSLVNLLT LLAWSWIQAL
LAGMSLNYAV EHLTGYSNLA LFTILCETLV LLIALRGHLG IERVERWAAI GMLLLAGAVF
YVMGQQFEFE SLLAMPTEPR NEITPGIAFD IVIATAFSWI PLAADYNRNC RSQGVAAVGT
WVGYVAATLL AMGLGATVSG FSVLTGMEQT YDPAVLLAGF GFGLPAAIVV FLSVMTTNVM
CVYSASLSYL NISPNTRFWK PALCIGVLSI LGSQIPGILD NFQSFLLVIG SVFIPAFAVL
IADYFLIHKG EYAVDELLSE DGGRYRYLNG FNPAAFVAYG LGAALAYYWG WVSPLAWGAS
LPVFLITAAS YAVLRRWVLV PRAQLA
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