Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1793 |
Symbol | |
ID | 5109373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1967252 |
End bp | 1967983 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503025 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001187289 |
Protein GI | 146306824 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG TCAGTCGTGA CCGCTGGTTC GAGGTGGAGC ACCGCCACGA TGGCATCTGC CTGATCCACG AGCCCTACGT GCGCCCCTTC TACCGCTGCA ACATGTGGCA TGTGCAGGGC CGTGCGCATG ACGTGCTGAT CGACTCCGGC TCCGGGCTGG TCAGCCTGCG CGAGCAGCTG CCGTGGCTGA CCGAGAAACC GCTGCTGGCG GTGGCCAGCC ACTGCCATTT CGACCATATC GCCGGGCATC ACGAATTCGC CGAGCGCCTG GTGCATCCGG CCGAGGCCGA GATCCTCGCC GCACCGGATG GCGCCAATAC CCTGGCCACG GACTTCGTCG GCGACGACAT GTTCGAGGCG CATCCGGACT GCCCGCTGTG CTACGCCGAA TACCGGGTAC GGGCAGCGCC GGCCACCCGC CTGATCGAGG ATGGCGATGT GCTGGATCTG GGAGATCGGG TGTTGCAGGT GCTGCACACG CCCGGCCATT CACCCGGCGG CATCAGCCTG TGGGAAGCGA GGACGCAAAC GCTGTTCTCC GGCGACATCC TCTACGACGG CCCGTTGATC GAGGACGCCT ACCACTCCAA CCTGGAGGAT TACGCGCGCA GCCTTGCGCG CCTGCGCGAG CTGCCCGTAC GCACCGTGCA TGGCGGGCAT TTCGCGAGTT TCTCCGGCGA GCGCATGCGC GAGCTGATAG ACGCCTGGTT CGACGCCCAT CGGCTCAGTT GA
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Protein sequence | MKIVSRDRWF EVEHRHDGIC LIHEPYVRPF YRCNMWHVQG RAHDVLIDSG SGLVSLREQL PWLTEKPLLA VASHCHFDHI AGHHEFAERL VHPAEAEILA APDGANTLAT DFVGDDMFEA HPDCPLCYAE YRVRAAPATR LIEDGDVLDL GDRVLQVLHT PGHSPGGISL WEARTQTLFS GDILYDGPLI EDAYHSNLED YARSLARLRE LPVRTVHGGH FASFSGERMR ELIDAWFDAH RLS
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