| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1784 |
|---|
| Symbol | |
|---|
| ID | 5109364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1956789 |
|---|
| End bp | 1957562 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640503016 |
|---|
| Product | glutamine amidotransferase, class-II |
|---|
| Protein accession | YP_001187280 |
|---|
| Protein GI | 146306815 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0578377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.786359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGAAT TGCTCGGCAT GAGCGCCAAC GTACCCACCG ATATCGTCTT CAGCTTCACC
GGGCTGATGC AGCGTGGCGG CCGCACCGGC CCGCACCGCG ACGGCTGGGG TATCGGTTTC
TACGAAGGGC GCGGCCTGCG CCTGTTTCAG GACCCGCGAG CGAGCAGCGA ATCGGAAGTG
GCGCAGCTGG TGCAGCGTTA TCCGATCAAG AGCGAGGTGG TGATCGGTCA CATCCGCCAT
GCCAACGTCG GCAAGGTCTG TCTGGCCAAC ACCCATCCCT TCGTTCGCGA GCTCTGGGGA
CGCAACTGGT GCTTCGCCCA CAACGGCCAG CTGGCCGGTC TCGAGGGTTC CACCAGCTTC
TACCGCCCGG TCGGCGATAC CGACAGCGAG GCGGCGTTCT GCGATCTGCT CAACCGCGTG
CGTCGCGCCT TTCCCGAACC GGTTTCGGTG GAGATGCTGC TGCCGGTGCT GGTGGCAGCC
TGCGCCAGCT ACCGCAAGCT CGGCGTGTTC AACTGCCTGC TCAGCGACGG CGATTGGCTG
TTCAGCTTCT GTTCGAGCAA GCTGGCGCAT ATCACCCGGC GCGCGCCGTT CGGCCCGGCG
CAGCTCAAGG ACGCCGAGCT GCGCGTGGAT TTCCAGGCGG AAACCACGCC CGACGACGTG
GTCACGGTGA TCGCCACCGA GCCGCTGACC GATAACGAGC ACTGGTCGCT GTATCAACCG
GGCGAGTGGC GCCTGTGGCG TCGCGGCGAA TCCATCGCCG ACGGCAGAGC CTGA
|
|---|
| Protein sequence | MCELLGMSAN VPTDIVFSFT GLMQRGGRTG PHRDGWGIGF YEGRGLRLFQ DPRASSESEV
AQLVQRYPIK SEVVIGHIRH ANVGKVCLAN THPFVRELWG RNWCFAHNGQ LAGLEGSTSF
YRPVGDTDSE AAFCDLLNRV RRAFPEPVSV EMLLPVLVAA CASYRKLGVF NCLLSDGDWL
FSFCSSKLAH ITRRAPFGPA QLKDAELRVD FQAETTPDDV VTVIATEPLT DNEHWSLYQP
GEWRLWRRGE SIADGRA
|
|---|
| |