Gene Pmen_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1778 
Symbol 
ID5109358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1952324 
End bp1952674 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content65% 
IMG OID640503010 
Producthypothetical protein 
Protein accessionYP_001187274 
Protein GI146306809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.539869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCAGCAAGCT CGACCGCATC CTCGCCGAAG CCCAGCAGCG TCGGGAAACC 
AGCTACCGCG AGAAGGCCCT GCGCATGTAT CCGCATATCT GCGGCCGCTG CGGGCGCGAA
TTCAGCGGCA AGCGCCTGAG CGAGCTCACC GTTCATCACC GTGACCACAA CCACGACAAC
AACCCGGAAG ATGGCTCCAA CTGGGAACTG CTGTGCCTGT ACTGCCACGA CAACGAGCAC
CAGCGCCAGG TCGACCTGCA CTACCAGAAG GAGGAAGCCG CCAGCGCCGG CTCCGGCAGC
AAGGTGACGC ACAAGGGGCT GGCCGGGCTG GCGGAGCTGC TCAAGCGCTG A
 
Protein sequence
MTTTSKLDRI LAEAQQRRET SYREKALRMY PHICGRCGRE FSGKRLSELT VHHRDHNHDN 
NPEDGSNWEL LCLYCHDNEH QRQVDLHYQK EEAASAGSGS KVTHKGLAGL AELLKR