| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1775 |
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| Symbol | |
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| ID | 5109355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1949467 |
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| End bp | 1950399 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503007 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001187271 |
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| Protein GI | 146306806 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.320294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.397808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC TGATTGCCGA GGACGATCAC GACCGCTACG CCCAGCACGT GCGCCATGCC
CGGCCCGAAC TGGAACTGGT GGCCAGCGCC GACCCTGCGC GATTGGCTGT GGCGGCAGGC
GATTGCCCGG TGTGGCTGGG GCAGCCCGAC CTGCTGATGC CCTTGCTGCG CCAGGGGCTG
CGTCCACGGT GGCTGCAATC GACCTGGGCG GGCATCACGC CGCTGCTGGC CGCCGACCTA
CCGCGGGATT ATCGGCTCAG TCGCGCCGTG GGCATTTTCG GGCAGGTGAT GGCCGAGTAC
GTGCTGGGCC ATCTGCTGGC GCATGAACGG CGCCTGTTCG CCCGCCTGGC CGCGCAGGTC
GAGCAGCGTT GGGATCACAG CCTGCCGCGC AGCCTGGCCG GGCGGCGCGC GCTGATCGTC
GGCTGTGGCG AGATCGGCCA GGCGGTGGCG CAGTTTCTTG CGCACTTCGG CGTGCAGCTG
CGTGGCGTCG CCAGTCAGGC GCGCACGCAG GCGCCCTTTG CCGACGTGGC TGCCATGGAT
GAATTGCCGC GCCTGATCGC CTGGGCCGAT TACGTGATCA ACCTGCTGCC GGACACCCCG
GCTACTCGCG ATCTGTACGA TGCCGAACTG CTGGCCGCCT TTCGTCCCGA GGCGTTGCTG
ATCAATGCCG GGCGCGGCAG TGCGGTGGTC GACGACGACC TGGTGACGGC GCTGGAGCAG
GGCAAACTGG CCGGCGCGGT GATCGATGTC TGCCGTCAGG AGCCGCTGCC GCCGGGCCAT
GCCTTCTGGA GCGCACCGCG TCTGCTGCTG ACCGGCCACA GCTCGGCGCC CACCGACCCG
GCGCTGATGG CCGAGCTGTT TCTGGACAAT CTGGCGCGCT GGCAGGTCGG AGAGCCGTTG
CGCGGTGAAG TGGATTTCGC CCGCGGCTAT TGA
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| Protein sequence | MRLLIAEDDH DRYAQHVRHA RPELELVASA DPARLAVAAG DCPVWLGQPD LLMPLLRQGL
RPRWLQSTWA GITPLLAADL PRDYRLSRAV GIFGQVMAEY VLGHLLAHER RLFARLAAQV
EQRWDHSLPR SLAGRRALIV GCGEIGQAVA QFLAHFGVQL RGVASQARTQ APFADVAAMD
ELPRLIAWAD YVINLLPDTP ATRDLYDAEL LAAFRPEALL INAGRGSAVV DDDLVTALEQ
GKLAGAVIDV CRQEPLPPGH AFWSAPRLLL TGHSSAPTDP ALMAELFLDN LARWQVGEPL
RGEVDFARGY
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