Gene Pmen_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1774 
Symbol 
ID5109354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1949170 
End bp1949463 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content63% 
IMG OID640503006 
Producthypothetical protein 
Protein accessionYP_001187270 
Protein GI146306805 
COG category[S] Function unknown 
COG ID[COG3100] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0857455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.437219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGTA TCTGTTCCAT CTACAAGAGC CCGCGCAAGA ACGAAATGTA CCTCTACGTG 
CTCAAGGCCG ATGCCCTGAC GCGGGTGCCC GAGGGCCTGC TCGGCATCTT CGGCCCGCCT
GCGCATGCCT TCGACCTGGT GCTCAGCCCG GAGCGTCAGC TGGCCCGCGA GGACATCGCC
ACTGTGCTGG AGAATCTCGA CAAGCAGGGT TATCACCTGC AGATGCCGCC GCCCGAGGAG
GATTACATCC AGCACCTGCC GGACGAGCTG CTCTGCCGCA ACGACCCGGT CTGA
 
Protein sequence
MKRICSIYKS PRKNEMYLYV LKADALTRVP EGLLGIFGPP AHAFDLVLSP ERQLAREDIA 
TVLENLDKQG YHLQMPPPEE DYIQHLPDEL LCRNDPV