Gene Pmen_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1760 
Symbol 
ID5109340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1934441 
End bp1934845 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content67% 
IMG OID640502992 
ProductMarR family transcriptional regulator 
Protein accessionYP_001187256 
Protein GI146306791 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0162725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCGA CTTCCTGCCT CTGTACCCAA CTGCGCCGCG CCAGCCGCGG CGTGACCCGT 
CGCTACGATG ACGCCCTGGC TGCCGTCGGA CTCGGTGCTG CGCAGTTTTC CCTGTTGCGC
CACGTGCAGC GGCTCGGGCA GCCGAGCATT TCCGCGCTGG CCGACGCCAT GGGGCTGGAT
CGCAGCACCC TGGGCCGCAA TCTGCGGGTG CTACAGGAGC AGGAGCTGCT GCAACTGGGA
GAAGGGCGCG ATTTGCGTGC TCGCGAGGTA CGGCTCACAG AGGCCGGCCT GCAACGTATC
GAACAGGCGC TGCCGCTGTG GGAACAGGTG CAGCGTGAGC TGAATGCTCG GCTCGGCGAG
GATCGCCGCG CGGAACTGAT GGCTCTGCTC GACCAACTGG CCTGA
 
Protein sequence
MLPTSCLCTQ LRRASRGVTR RYDDALAAVG LGAAQFSLLR HVQRLGQPSI SALADAMGLD 
RSTLGRNLRV LQEQELLQLG EGRDLRAREV RLTEAGLQRI EQALPLWEQV QRELNARLGE
DRRAELMALL DQLA