| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1758 |
|---|
| Symbol | |
|---|
| ID | 5109338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1933067 |
|---|
| End bp | 1933639 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640502990 |
|---|
| Product | phosphoglycerate mutase |
|---|
| Protein accession | YP_001187254 |
|---|
| Protein GI | 146306789 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0406] Fructose-2,6-bisphosphatase |
|---|
| TIGRFAM ID | [TIGR03162] alpha-ribazole phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0909512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAGC TGGAACTGCT GCGTCATGGC GAAACCGAGC AGGGCGGTGG CTTGCGCGGC
AGCCTGGACG ATGCGCTGAC CGAGCAGGGC TGGGCGCAGC TGCGCGCCGC AGTGCAGGGA
GCGGGGCCCT GGGATCGTCT GATTAGCTCG CCGCTGCAGC GCTGCGCGCG CTTCGCCGAG
GAGGTGGCGG CGGCCCAGGC GTTGCCACTG CACTACGAGC CGGGGCTGCA GGAGCTGCAT
TTCGGCGATT GGGAAGGGCG TAGCGCCGCG CAGTTGATGG AAACTCATGC CGAGGCGCTG
GGCCAATTCT GGGCCGACCC TTACACCTTC ACGCCACCCA ACGGCGAGCC GCTGCTGCAG
TTCGAGGCCC GCGTGTTGGC TGCGCTGCAA GGTCTGGCGC TGGCCCATGC CGGCCAGCGC
CTGCTGCTGA TCACCCACGG CGGCGTGATG CGTCTGCTGC TGGCGCGCGC ACGCGGTCTG
CCGCGCCAGG ATCTGCTGCA AGTCAACGTC GGCTATGCCC AGCGCTTTCG CCTGCGCCTG
GCTGCCGACG GGCAGCTGAC GGAGCTGGCA TGA
|
|---|
| Protein sequence | MLELELLRHG ETEQGGGLRG SLDDALTEQG WAQLRAAVQG AGPWDRLISS PLQRCARFAE
EVAAAQALPL HYEPGLQELH FGDWEGRSAA QLMETHAEAL GQFWADPYTF TPPNGEPLLQ
FEARVLAALQ GLALAHAGQR LLLITHGGVM RLLLARARGL PRQDLLQVNV GYAQRFRLRL
AADGQLTELA
|
|---|
| |