| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1757 |
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| Symbol | cobT |
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| ID | 5109337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1932012 |
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| End bp | 1933067 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502989 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001187253 |
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| Protein GI | 146306788 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.169913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC AATGGTGGCA GGGGCCGTGC CAACCGCTCG ACCACGTGGC TCGAACCAAG
GCCGAAAGCC GTCAGCAGCA GCTGACCAAG CCCGCCGGCT CGCTGGGGCG TCTGGAAAAA
CTGGCCATTC ATCTGGCCGC GCTGCAGGGG CGCGAAAGGC CCAGCCTGGA CAAACTGTGG
ATCGCCATCT TCGCCGGCGA CCATGGCGTG GTCGCCGAGG GAGTGTCCGC CTACCCGCAG
GCGGTGACCG GGCAGATGCT GGCCAACTTC GTCAGCGGTG GTGCGGCGAT CAGCGTACTG
GCGCGCGAAC TCGATGCGGC CCTGGAGGTG ATCGACCTGG GCACCGCCGA GCCGCTGCCG
CCGTTGCCCG GCGTGCGCCA CCTGTACGTT GGCGCCGGTA CGCAGAATCT CGCCCGTGAG
CCGGCCATGA CCCTGTCGCA GCTGTTGATC TGCCTGGAGG CCGGGCGCGA CAGCCTGCTG
CGCGCACGGG CGGTGGGGTG CGACCTGTTC GTCGGCGGCG AGATGGGCAT CGGCAACACC
ACGGCAGCGG CGGCGCTGGC CTGCTGGTTG CTGGGTTGTC CGGCAAGCGA GCTGGCCGGT
CCTGGCACGG GCCTGGACGG TGCAGGTGTG GCGCACAAGG CGCGGGTGAT CGATGCGGCG
CTGGCCCTGC ACCATGCGCA GATCGACGGC CCGTTACAGG CGCTGGTCCA CCTGGGCGGC
TTCGAGATCG CTGCGCTCAC CGGCGCTTAC CTGGCGGCTG CGCAGCAGGG CATCGCGGTA
CTGGTCGATG GCTTTATCTG CAGCGTCGCG GCCCTGCTGG CGGTGCGCCT GAATCCGGGC
TGCCGCGACT GGCTGCTGTT CGCCCACCAT GGCGCCGAAC CCGGTCATGT GCGCGTGCTG
CAGGCATTGG GCGCCGAACC CTTGCTGGAG CTGGGGCTGC GCCTGGGCGA GGGCAGCGGG
GCGGCTTTGG CGGTGCCGCT ATTGCGCCTG GCCTGCAGCC TGCACGGGCA GATGGCGACC
TTCGCCGAGG CGGCCGTGGC GCAGAGGCCG CAGTGA
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| Protein sequence | MKLQWWQGPC QPLDHVARTK AESRQQQLTK PAGSLGRLEK LAIHLAALQG RERPSLDKLW
IAIFAGDHGV VAEGVSAYPQ AVTGQMLANF VSGGAAISVL ARELDAALEV IDLGTAEPLP
PLPGVRHLYV GAGTQNLARE PAMTLSQLLI CLEAGRDSLL RARAVGCDLF VGGEMGIGNT
TAAAALACWL LGCPASELAG PGTGLDGAGV AHKARVIDAA LALHHAQIDG PLQALVHLGG
FEIAALTGAY LAAAQQGIAV LVDGFICSVA ALLAVRLNPG CRDWLLFAHH GAEPGHVRVL
QALGAEPLLE LGLRLGEGSG AALAVPLLRL ACSLHGQMAT FAEAAVAQRP Q
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