| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1756 |
|---|
| Symbol | cobU |
|---|
| ID | 5109336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1931494 |
|---|
| End bp | 1932015 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640502988 |
|---|
| Product | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase |
|---|
| Protein accession | YP_001187252 |
|---|
| Protein GI | 146306787 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2087] Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.191917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAT TGATCCTCGG CGGTGCCCGT TCCGGCAAGA GCCGCCTGGC CGAGAGGCTG
GCCGACGAGT CCGGGCTGGA GGTGGTTTAC ATCGCCACCA GCCAGCCGCT CGACGGCGAG
ATGAACGAGC GCGTTGCCCA GCACCGTGCC CGGCGTCCGG CTCACTGGGC GCTGGTGGAG
GAGCCGCTGG CGCTGGCCCG TGTGCTGCAG GAAGAGGCCG CTCCCGGGCG CTGCCTGCTG
GTGGACTGCC TGACCCTGTG GCTGACCAAC CTGCTGATGC TGGAGGACGC GCAGCGCCTG
GCTGCCGAGC GCGAGGCGCT GCTCGCTTGT GTGGAGCAAT TGCCCGGGCG CATTCTGCTG
GTCAGCAACG AGACCGGCCT GGGCGTGGTG CCATTGGGCG AACTCACCCG GCGTTATGTC
GACGAGGCCG GCTGGCTGCA CCAAGCGCTG GCCGAACGCA GCCAGCGCGT GCTGTTCACC
GTTGCCGGCC TGCCGATGAC CCTCAAGGGA GATGCCCTAT GA
|
|---|
| Protein sequence | MLELILGGAR SGKSRLAERL ADESGLEVVY IATSQPLDGE MNERVAQHRA RRPAHWALVE
EPLALARVLQ EEAAPGRCLL VDCLTLWLTN LLMLEDAQRL AAEREALLAC VEQLPGRILL
VSNETGLGVV PLGELTRRYV DEAGWLHQAL AERSQRVLFT VAGLPMTLKG DAL
|
|---|
| |