Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1753 |
Symbol | cobD |
ID | 5109333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1928063 |
End bp | 1928971 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640502985 |
Product | cobalamin biosynthesis protein |
Protein accession | YP_001187249 |
Protein GI | 146306784 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGG CGCTGATCAC CTGCGCCGGT GTGGCGCTGG ACGCCGTGCT GGGCGAGCCA CGCCGCGCGC ATCCGCTGGT GGCCTTCGGG CGCCTGGCTG ATCGCCTGGA GCAGCGTTTC AACCCGGCCG GCGGTGGCTG GCGCAGCCAT GGCGTCACCG CCTGGTGCCT GGCAGTGCTG CCGCTGACCC TGCTTACCTG GCTGCTGGTG CAGATCAGCG GGGTGGGCTG GGCGGTGGAG ATCTTCGCCC TGTATTTCGC CCTTGGCCTG CGCAGTCTTT ACGAGCACGC GCAGCCGGTG GCCCGCGCGC TGCGCCTGGG CGATCTGCAG CTGGCACGCG AGCGGGTCGG CTGGATGGTC AGCCGCAACA CCGCCGAGCT GGACGCCACC GGCGTGGCTC GCGCCGGTAC CGAGTCGGTG CTGGAGAACG GTTCCGATGC GGTATTCGCC GCCTTGTTCT GGTTCATCGT CGCCGGTGCG CCCGGCGTGG TGCTGTACCG CCTGAGTAAT ACCCTGGACG CCATGTGGGG CTATCGCAAC GAGCGCTTCG AGCGCTTCGG CTGGGCGGCG GCGAAGATCG ATGACCTACT CAATTACATC CCGGCGCGCT TGGTGGCGCT GACCTATGCG CTGCTCGGGA ATACCCTTCT GGCGCTGCGC TGCTGGCGCC GGCAGGCGCC GTTGTGGGAC AGTCCCAATG CTGGCCCGGT GATGGCCGCT GGCGCCGGCA GCCTGGGAGT GAGTCTCGGT GGCGCCGCCG AATACCACGG CGAGCTGCAT GAGCGCCCGC AGCTGGGCGA GGGCCCGGCG CCGCGCGCGC GGGATATCGA ACGGGCGATG AACCGGGTCG TTGCCGGCGT TGGCCTGTGG TTGCTGTGCC TGATGATCTG GGAGGTGCTG GGTGCTTGA
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Protein sequence | MSLALITCAG VALDAVLGEP RRAHPLVAFG RLADRLEQRF NPAGGGWRSH GVTAWCLAVL PLTLLTWLLV QISGVGWAVE IFALYFALGL RSLYEHAQPV ARALRLGDLQ LARERVGWMV SRNTAELDAT GVARAGTESV LENGSDAVFA ALFWFIVAGA PGVVLYRLSN TLDAMWGYRN ERFERFGWAA AKIDDLLNYI PARLVALTYA LLGNTLLALR CWRRQAPLWD SPNAGPVMAA GAGSLGVSLG GAAEYHGELH ERPQLGEGPA PRARDIERAM NRVVAGVGLW LLCLMIWEVL GA
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