| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1750 |
|---|
| Symbol | |
|---|
| ID | 5109330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1925506 |
|---|
| End bp | 1926117 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640502982 |
|---|
| Product | cob(I)yrinic acid a,c-diamide adenosyltransferase |
|---|
| Protein accession | YP_001187246 |
|---|
| Protein GI | 146306781 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2109] ATP:corrinoid adenosyltransferase |
|---|
| TIGRFAM ID | [TIGR00708] cob(I)alamin adenosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAT CCGCCGAACG CGACGCCCGC CACAAGGCGC GCATGCAGCG CAAGAAAGCC
CTGATCGACG AGAAGATCGC CCAGGCCCAG GACGAATACG GCCTGCTGCT GGTGCACAGC
GGCAATGGCA AGGGCAAGAG CAGCAGCGCC TTCGGCATGG TCGCGCGCGC CCTTGGGCAT
GGCATCAGGG TTGGCGTGGT GCAATTCATC AAGGGCGCGG CCAGCACCGG GGAGGAAACC
TTCTTCCGCC GTTTTCCCGA GGAAGTCAGC TACCACGTGA TGGGCGAGGG CTTCACCTGG
GAGACCCAGG ATCGTCAGCG CGACATCGCC AAGGCGCAGG AGGCCTGGGC CGTGGCCCGG
CGTCTGCTCG GCGACGAGTC CGTTGGCCTG GTGGTGCTGG ACGAGCTGAA CATCGCCCTC
AAGCACGGTT ACCTCGAACT GGATGCGGTG CTGGCCGATA TCGAGGCCCG GCCGCTGCTG
CAGCATGTGG TGGTGACCGG CCGCGGTGCC CTGCCGGGGA TGATCGAGGC GGCCGATACG
GTCACCGAGA TGAGCCTGGT CAAGCATGCG TTCAAGTCTG GCGTGAAGGC GCAGAAGGGC
ATCGAATTCT GA
|
|---|
| Protein sequence | MSESAERDAR HKARMQRKKA LIDEKIAQAQ DEYGLLLVHS GNGKGKSSSA FGMVARALGH
GIRVGVVQFI KGAASTGEET FFRRFPEEVS YHVMGEGFTW ETQDRQRDIA KAQEAWAVAR
RLLGDESVGL VVLDELNIAL KHGYLELDAV LADIEARPLL QHVVVTGRGA LPGMIEAADT
VTEMSLVKHA FKSGVKAQKG IEF
|
|---|
| |