| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1748 |
|---|
| Symbol | |
|---|
| ID | 5109328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1924091 |
|---|
| End bp | 1924750 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640502980 |
|---|
| Product | caffeoyl-CoA O-methyltransferase |
|---|
| Protein accession | YP_001187244 |
|---|
| Protein GI | 146306779 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4122] Predicted O-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCAGC GTACGCTGCA ACTCGACGAC GCCCTCTACC AGTACCTGCT GGATGTCTCC
CTGCGCGAGT CGCCGCTGCT CGCCCGCCTG CGTGAAGAAA CCGCGCAGCT AAGCCAGGCG
CGCTGGCAGA TTGCGCCGGA GCAGGGGCAG TTCATGGCGC TGCTGGTGCG CCTCACCGGC
GCCCGGCGGG TCATCGAGGT GGGCACTTTC ACCGGCTACA GTGCGCTCTG CATGGCGCAG
GCCCTGGGCG AGGGTGGGCG CCTGATCTGC TGCGACCTGC CTGGAGACTA CAACGCCACT
GCGCGCCGCT ACTTCGCCGA GGCCGGGGTT GCCGAATCCA TCGAGTGGCG GCTGGGCCCG
GCGCTTGAAA GCCTGGCGGC GCTGGCTCGA GAGGGACAGG GCGTCTTCGA CCTGATCTTC
GTCGATGCCG ACAAGGCCAA CTATCCGGCC TACCTGGAGC AGGCCCTGTT TCTGCTGCGT
CAGGGTGGCC TGCTGCTGTT CGACAATACC CTGTGGAGCG GTCGGGTGCT GCAACGCTCC
CCCGACAGCG AAGACACGCG CGCGATCCAG GCGCTCAACC TGGCCCTGCG TGACGACCCG
CGCATCGATC TGTCGCTGTT GCCGCTGGGC GACGGTCTGA CGCTCTGCCG CAAGCGTTAG
|
|---|
| Protein sequence | MTQRTLQLDD ALYQYLLDVS LRESPLLARL REETAQLSQA RWQIAPEQGQ FMALLVRLTG
ARRVIEVGTF TGYSALCMAQ ALGEGGRLIC CDLPGDYNAT ARRYFAEAGV AESIEWRLGP
ALESLAALAR EGQGVFDLIF VDADKANYPA YLEQALFLLR QGGLLLFDNT LWSGRVLQRS
PDSEDTRAIQ ALNLALRDDP RIDLSLLPLG DGLTLCRKR
|
|---|
| |