Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1746 |
Symbol | |
ID | 5109326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1922863 |
End bp | 1923474 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502978 |
Product | NLP/P60 protein |
Protein accession | YP_001187242 |
Protein GI | 146306777 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAC GCTTCGCACC CCTCGTGCCC ATTGCACTGA CAGCCTTCCT CGCCGCCTGT GCCGGCCATG CGCCGCAGCC CCAGGTTACC GAGCCCGCGG TCAAGCCCGT CGCTCAGCAG GTGAAACCTG CCGAGGACGA AATCACCGCT CTGATCGACG ACAAACCCTA CGAAATGCCG CAACTGGCCG ACAGCCTGCT CGAGCTGGGT CGTTCGCTGA TCGGCACCCG TTATCGCTAC GGCGGTACGT CGGTGCAGTC CGGCTTCGAT TGCAGCGGCT TCGTCGGCTA CGTGTTCCGT GAGGAAATCG GCCTGGAACT GCCACGTTCC ACGCGTGAAC TGATCAACCT GGACGCGCCC AAGGTGGCCC GTGCCGATCT GGAGCCCGGC GATCTGATCC TGTTCAACGA TCGCGGTCGT GGTCGTGTCA GCCACGCCGG CATCTACCTG GGCGATGATC AGTTCATCCA TTCCAGCAGC AGCCGCAGCG GCGGCGTGCG CATCGACAGC CTGGACGACA GCTACTGGAA TCGCAGCTAC CTGCAGGCCA AGCGCGTGCT GGCGCTGGCT CCGGTGGAAG AGAGCCAGGC GCAGGCCAAG CGCCATCCTT GA
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Protein sequence | MLKRFAPLVP IALTAFLAAC AGHAPQPQVT EPAVKPVAQQ VKPAEDEITA LIDDKPYEMP QLADSLLELG RSLIGTRYRY GGTSVQSGFD CSGFVGYVFR EEIGLELPRS TRELINLDAP KVARADLEPG DLILFNDRGR GRVSHAGIYL GDDQFIHSSS SRSGGVRIDS LDDSYWNRSY LQAKRVLALA PVEESQAQAK RHP
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