| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1724 |
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| Symbol | |
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| ID | 5109304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1898763 |
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| End bp | 1900310 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502955 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001187220 |
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| Protein GI | 146306755 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0701995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.167784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATCTCG GAAAAATCAT CAGCCGTAGT GCACGTTACT GGCCAGACCA TGAGGCACTG
GTCGACAGCA AACAGCGCAT CACCTTCGCC CAGCTCGAAC GCCGCACCAA TCGCCTGGCC
TCGGGTCTGT TCGATCTTGG CCTGCAGCCG GCGGCCCACA TCGCCATCCT GGCCCTGAAC
CGGGTCGAAC TGGCCGAAGC GGAAGTCGCC TTCTACAAGG CGGCGATGGT CAAGGTACCG
ATCAACGCCC GCCTGTCCCT GGACGAGATC ATCCAGATCC TCAACGACTC GCACAGCCAG
GCGGTGATCA CCGAGGGGCG CTTCGCCGCG GCCCTGCAGG CACGCCGTGC GGAGACCCCT
CGGCTGCGCT GGATCATCTC GCTCGACGAC GAGGCCGGCG ATATCGCCTA TCGCGCGCTG
CTGGCGGGCG GCAGCGAGGC GCCGGTGCAC AGCGACCCGG CCGACGATGC CCTGGCCGTG
CTGCACTACA CCTCCGGCAG TTCCGGGGTA CTCAAGGCTG CCATGCTCAG CTTCGGCAAC
CGCAAGGCGC TGATCCGCAA GAGCATCGCC AGCCCTACCC GCCGCGCCGC GCCGGGCGAC
GTGATGGCCC ATGTCGGCCC CATCACCCAC GCCAGCGGCA TGCAGATCAT GCCGCTGCTG
GCGGTAGGCG CCTGCAACCT GCTGCTGGAG CGCTACGACG ACCGTCTGCT GCTGGAGACC
ATCGAGCGCG AACGGGTGAC CCGCCTGTTC CTGGTGCCGG CAATGATCAA TCGCCTGGTC
AACTTCCCCG AGGTGGAGCG CTTCGATCTC TCCAGCCTGC GCCTGGTGAT GTACGGCGCA
GCGCCCATGG CGCCGGCGCT GGTCAAGCGC GCCATCGAAG TGTTCGGCCC CATCCTGGCC
CAAGGCTATG GCGCGGGCGA GACCTGTTCG CTGGTCACGG TGCTGACCGA GCAGGACCAC
CTGATCGAGG ACGGCGACTT CAGCCGCCTG GCCTCGTGCG GCCGCTGCTA CTTCGAGACC
GACCTGCGGG TGGTCAACGA CAACTTCGAA GATGTGAAGC CCGGCGAAAT CGGCGAAATC
GTGGTCAAGG GCCCGGACAT CATGCAGGGC TACTGGCAGG CGCCGGAGCT CACCGCAGAA
GTGATGCGCG ACGGCTACTA CCTCACCGGC GACCTGGCCA CGGTGGATGA GCGTGGTTAC
GTGTTCATCG TCGACCGCAA GAAGGAAATG ATCATTTCCG GCGGCTTCAA CATCTACCCC
ACCGAAGTGG AACAGGTGCT CTACAGCCTG CCCCAGGTGT TCGAGGCAGC CGTGGTCGGC
GTGCCCGACG AGCAATGGGG CGAAGCCGTG CGCGCCGTGG TGGTGCTCAA GCCGGGCGAG
AGCCTGAGCG CCGAGGCCAT CATCGAGCAC TGCGGGCGCA GCCTGGCCAG CTTCAAGAAA
CCGCGCGCAG TGGACTTCGC CAAGGAACTG CCGAAGAACC CCAACGGCAA GGTGGTGCGC
CGCCTGATTC GCGAAGCCTA CTGGCAGAAC AGCGACCGCC GCATCTGA
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| Protein sequence | MNLGKIISRS ARYWPDHEAL VDSKQRITFA QLERRTNRLA SGLFDLGLQP AAHIAILALN
RVELAEAEVA FYKAAMVKVP INARLSLDEI IQILNDSHSQ AVITEGRFAA ALQARRAETP
RLRWIISLDD EAGDIAYRAL LAGGSEAPVH SDPADDALAV LHYTSGSSGV LKAAMLSFGN
RKALIRKSIA SPTRRAAPGD VMAHVGPITH ASGMQIMPLL AVGACNLLLE RYDDRLLLET
IERERVTRLF LVPAMINRLV NFPEVERFDL SSLRLVMYGA APMAPALVKR AIEVFGPILA
QGYGAGETCS LVTVLTEQDH LIEDGDFSRL ASCGRCYFET DLRVVNDNFE DVKPGEIGEI
VVKGPDIMQG YWQAPELTAE VMRDGYYLTG DLATVDERGY VFIVDRKKEM IISGGFNIYP
TEVEQVLYSL PQVFEAAVVG VPDEQWGEAV RAVVVLKPGE SLSAEAIIEH CGRSLASFKK
PRAVDFAKEL PKNPNGKVVR RLIREAYWQN SDRRI
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