Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1716 |
Symbol | |
ID | 5109296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1889645 |
End bp | 1891033 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502947 |
Product | hypothetical protein |
Protein accession | YP_001187212 |
Protein GI | 146306747 |
COG category | [S] Function unknown |
COG ID | [COG5361] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0458772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0905883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTCG CTAAGAAGAC TCGTTGGCGC CTGGGCCTCG TCGTCATGCT CGTGCTGCTG AGCGGCCTGG CCACCCAGCG CGTGATGCAG CAGGCGCGGG AAACGGCCCA GGCCTACCTG TTCGCCTACC CGCTGGTGTT GATGGAGCTG ACCAAGCAGC ATCAGCAGCT GCTCGGCACC ACCGCTATCA ACGGCTTCCG CCACAGCCGG CGCTTTCCCG ACGCGCGCTT CAACAGCGTG GTATCACCGA ACGTCGACAC CCTGTACAGC ATCGTGCACT TCGATCTGCG CCAGGAGCCG GTGGTGATGA GCACTCCGGA CACCAGCGGG CACTACTACA TGATGCCGAT CATGGATGCC TGGACCAACG TGGTGAGCAG CCCCGGTACG CGCACCATCG GCAGCCGCGC ACAAACCTAT CTGGTCGTGG GACCGACCTG GCGTGGCGAG GTGCCGGCCG GCATGCAGCC GATCCGCATC CCGACGCAGA TGGCCTGGAT GATCGGCCGC ATCAAGAGCC GCGGCCCAGC CGATTACGCC GAGGTGCACA CCCTGCAGGA CCGCTTCCGC ATCATGCCGC TGAGCGCCTG GCAGGGCCGC CCGGTTACGC CCTTACCGAC AGCGATGACC GAACTACCCA CGCTGGACCG CGCCACGGGG CCGGACCGGC AGCTGGCCGG CTGGAGCCGC GAGGACTTCT TCGGCGCCTT CTGCCGACTG CTGACCGACA ACCCGGCCCG CGCCGAGGAC GCGCCGATGC TCGCACGCAT TCAGGCCACC GGCCTGCTCG ACGAGGGCTG TGCACTGCAG CAGTCGCCAC TGCAGCGTCT CGGCAGTGCA CTGGGCTATC GCCGGGTGGT CGCCATGCTC AACGACAGCC AGCGCCTGAT GGGTGAACGC AAGACCTACC AGGGCTGGCG CATCGGCTAC GAGTTGGGCG AGTACGGCAC CCGCTACGCG CAGCGCGCGC TGGTGGCCAA GATCGGGCTG GGTGCCAACT CGCCGGAAGA TGCCATCTAC CCGAACCTGC ATACCGATAC CGAGGACCGT CCGCTAGCGG GCAACAGACG CTACGTGCTG CACTTCGCCG CCGGGCAATT GCCACCGGTA CGCGCCTTCT GGTCGCTGAC CCTGTACGAC GAGCGCCAGC TGCTTTCGGC CAACCCGCTC GACCGCTATG CCCTCGGTGA CCGCGACGAC CTGCACTACA ACCCGGACGG CTCGCTGGAC ATCTTCGTCC AGCATCAGGC GCCGACCGAC CCGGCACAAC ACAGCAACTG GCTGCCAGCG CCCGAGGGCC GCTTCAACCT GTTCCTGCGC CTGTACTGGC CGCAGGCCGA CGTGCTGGAA AGACGCTGGC TGCCGCCGGC AATCCGCACG CTGCCCTGA
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Protein sequence | MRFAKKTRWR LGLVVMLVLL SGLATQRVMQ QARETAQAYL FAYPLVLMEL TKQHQQLLGT TAINGFRHSR RFPDARFNSV VSPNVDTLYS IVHFDLRQEP VVMSTPDTSG HYYMMPIMDA WTNVVSSPGT RTIGSRAQTY LVVGPTWRGE VPAGMQPIRI PTQMAWMIGR IKSRGPADYA EVHTLQDRFR IMPLSAWQGR PVTPLPTAMT ELPTLDRATG PDRQLAGWSR EDFFGAFCRL LTDNPARAED APMLARIQAT GLLDEGCALQ QSPLQRLGSA LGYRRVVAML NDSQRLMGER KTYQGWRIGY ELGEYGTRYA QRALVAKIGL GANSPEDAIY PNLHTDTEDR PLAGNRRYVL HFAAGQLPPV RAFWSLTLYD ERQLLSANPL DRYALGDRDD LHYNPDGSLD IFVQHQAPTD PAQHSNWLPA PEGRFNLFLR LYWPQADVLE RRWLPPAIRT LP
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