Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1714 |
Symbol | |
ID | 5109688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1886355 |
End bp | 1886903 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502943 |
Product | cytochrome B561 |
Protein accession | YP_001187210 |
Protein GI | 146306745 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00452879 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.140891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGA AGAACACGCC CTCCCGCTAT GGCAGCCTGT CCGTCGGCCT GCACTGGCTG ATGCTGATTC TGCTCGCTGC CGTCTACGCC TGCATCGAAC TCAAGGGTAA CTTCCCCAAG GGCAGCGACA CTCGCGAGTT GCTCAAGCAG TGGCACTTCA TGCTCGGCCT GACGGTGTTT GCACTGGTCT GGCTGCGCCT GCTGGCGCGC CTGATCGCTC CGACACCGCG AATCGAGCCG CCGCTGCCCG CCTGGCAGGC CATAGCGGCG CAGCTGATGC ATGCCGCCCT GTACGCCCTG ATGATCGGCG CACCGCTGGC CGGCTGGCTG GTTCTCAGCG CCGCCGGCAA ACCCATCCCC TTCTTCGGCC TGGAACTGCC GGCGCTGATC GATGCGAACC GGGATCTGGC CGGCCGGATC AAGGAACTGC ACGAGCTGGC CGGCACGACC GGTTACTGGC TGATCGGCCT GCATGCCCTC GCCGGCCTGT ATCACCATTA CGTGGTGCGC GATAACACCC TGATCCGCAT GCTGCCGCAA CGCAATTGA
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Protein sequence | MNWKNTPSRY GSLSVGLHWL MLILLAAVYA CIELKGNFPK GSDTRELLKQ WHFMLGLTVF ALVWLRLLAR LIAPTPRIEP PLPAWQAIAA QLMHAALYAL MIGAPLAGWL VLSAAGKPIP FFGLELPALI DANRDLAGRI KELHELAGTT GYWLIGLHAL AGLYHHYVVR DNTLIRMLPQ RN
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