Gene Pmen_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1714 
Symbol 
ID5109688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1886355 
End bp1886903 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content65% 
IMG OID640502943 
Productcytochrome B561 
Protein accessionYP_001187210 
Protein GI146306745 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00452879 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.140891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGA AGAACACGCC CTCCCGCTAT GGCAGCCTGT CCGTCGGCCT GCACTGGCTG 
ATGCTGATTC TGCTCGCTGC CGTCTACGCC TGCATCGAAC TCAAGGGTAA CTTCCCCAAG
GGCAGCGACA CTCGCGAGTT GCTCAAGCAG TGGCACTTCA TGCTCGGCCT GACGGTGTTT
GCACTGGTCT GGCTGCGCCT GCTGGCGCGC CTGATCGCTC CGACACCGCG AATCGAGCCG
CCGCTGCCCG CCTGGCAGGC CATAGCGGCG CAGCTGATGC ATGCCGCCCT GTACGCCCTG
ATGATCGGCG CACCGCTGGC CGGCTGGCTG GTTCTCAGCG CCGCCGGCAA ACCCATCCCC
TTCTTCGGCC TGGAACTGCC GGCGCTGATC GATGCGAACC GGGATCTGGC CGGCCGGATC
AAGGAACTGC ACGAGCTGGC CGGCACGACC GGTTACTGGC TGATCGGCCT GCATGCCCTC
GCCGGCCTGT ATCACCATTA CGTGGTGCGC GATAACACCC TGATCCGCAT GCTGCCGCAA
CGCAATTGA
 
Protein sequence
MNWKNTPSRY GSLSVGLHWL MLILLAAVYA CIELKGNFPK GSDTRELLKQ WHFMLGLTVF 
ALVWLRLLAR LIAPTPRIEP PLPAWQAIAA QLMHAALYAL MIGAPLAGWL VLSAAGKPIP
FFGLELPALI DANRDLAGRI KELHELAGTT GYWLIGLHAL AGLYHHYVVR DNTLIRMLPQ
RN