| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1705 |
|---|
| Symbol | |
|---|
| ID | 5109679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 1875245 |
|---|
| End bp | 1875949 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640502934 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001187201 |
|---|
| Protein GI | 146306736 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.19397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATC TGGTCACCCC GGTCGGTATC GTCCGCTCCT GTTTCAAGGA AAAATTCGCC
ATCCCCCGTC AGCCCCATCT GGCGCCCGCC GCCCGCGGCG TGCTGGAGTT GCTGCCGCCC
TTCGATCAGG GCGACGCAGT TCAGGGTCTG CAGCAGGTCA GCCATGTCTG GCTGCTGTTT
CTCTTTCACC AAACGCTGGA AGACAAGCCG CGCCTGAAGG TGCGGCCGCC GCGTCTGGGC
GGCAATCAGT CGGTCGGCGT GTTCAGCACC CGCGCCACGC ACCGGCCCAA TGGCATCGGC
CAGTCGGTGG TGCGCCTGGA ACGGGTCGAG CCGGATCGGC TGTACCTGTC CGGCATCGAC
CTGCTCGACG GCACGCCCGT GCTGGATATC AAGCCCTATG TGCCTTATGC CGATGCCGTG
GCAGGCGCGC GCAACGACAT GGCCGAGGCG CCGCCGCCGC TGATCGCCGT GGACTGGCAG
GACGATGCGC TGGTACAGGC ACGCCGGCAT GCGTTGCGCT TGGCCGAGCC CCTGGTGGAA
CTGATCGAAC AGTGCCTGGC GCAGGACCCG CGCCCGGCTT ACCAGCAGCC GCAACCCGAA
CGGCGTTACG GCGCGCGCTT CTGGGATCTG GACGTGCACT GGCACTACCC CGAGCCTGGG
CGCATCCGCG TGCTGGACTT GCAGCGCGTT GAAGAGACCA TCTAG
|
|---|
| Protein sequence | MQHLVTPVGI VRSCFKEKFA IPRQPHLAPA ARGVLELLPP FDQGDAVQGL QQVSHVWLLF
LFHQTLEDKP RLKVRPPRLG GNQSVGVFST RATHRPNGIG QSVVRLERVE PDRLYLSGID
LLDGTPVLDI KPYVPYADAV AGARNDMAEA PPPLIAVDWQ DDALVQARRH ALRLAEPLVE
LIEQCLAQDP RPAYQQPQPE RRYGARFWDL DVHWHYPEPG RIRVLDLQRV EETI
|
|---|
| |