Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1686 |
Symbol | |
ID | 5109660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1855905 |
End bp | 1856891 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502915 |
Product | hypothetical protein |
Protein accession | YP_001187182 |
Protein GI | 146306717 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.658717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATTT CTTCCGGCCG TTGGCTATAC GGCCTGCTGC TCGCCCTGAC CACGTCCGTG TTGTGGGGCA TCCTGCCGAT CAAACTGAAA GAAGTTCTTC AGGTGATGGA CCCGATCACC GTCACCTGGT ACCGCCTGGC GGTGGCCGGT TCGCTGTTGC TGGCCTACCT CGCCGCCTCG CGTCGTTTGC CGCGCTTTCG CCCGCTGGGC CGCAAGGGCG GCTGGCTGCT GGCGCTGGCC GTCGCCGGGC TGACCGCCAA CTACGTGCTC TATCTGATGG GGCTCAACCT GCTCAGCCCG GGCACCACGC AACTGGTGAT CCAGGTGGCG CCGATTCTGC TGCTGATCAG CAGCCTGTTC GTTTTCCGCG AGCGGTTCAG CCTGGGCCAG GCGATTGGCC TGCTGGTGAT GCTGCTGGGC TTCGGCCTGT TCTTCAACCA GCGCCTGGGC GAGCTGCTGA CTTCGCTGAC CACCTACACC ACGGGTGTGC TCACCGTGCT GGCGGCTGCT TTCGTCTGGA CCTTCTACGG CCTGGCGCAG AAGCAGTTGC TGACGCTGTG GAGTTCGGTG CAGGTGATGA TGGTGATCTA CCTGGCCTGC GCACTGCTGC TGACGCCCTG GGCGCATCCG CTGCAAGTGC TGGAGTTGAG CCCGCTGCAG GGCTGGTTGC TGCTCGCCTG CTGCCTGAAC ACTCTGGTGG CTTACGGGGC CTTCGCCGAG GCGCTGGCGC ACTGGGAGGC CTCCAGGGTC AGCGCGACCC TGGCCCTGAC GCCACTGGTG ACCTTCGTTT CGGTGGCCCT GGCGGCGAGC TGGTGGCCCG ACCACGTGCT GCCCGAGCAG GTCAACTGGA TCGCCTACGC CGGTGCGGTG GTGGTGGTCC TGGGTTCGGC GCTGACCGCC CTTGGGCCAT CGATCATGGC CAGCTGGCGT GCGCGAGCGG CCTCCATACA CCTTGACGAG ACGGAGCGAG AGCAATGGAC GAAATGA
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Protein sequence | MHISSGRWLY GLLLALTTSV LWGILPIKLK EVLQVMDPIT VTWYRLAVAG SLLLAYLAAS RRLPRFRPLG RKGGWLLALA VAGLTANYVL YLMGLNLLSP GTTQLVIQVA PILLLISSLF VFRERFSLGQ AIGLLVMLLG FGLFFNQRLG ELLTSLTTYT TGVLTVLAAA FVWTFYGLAQ KQLLTLWSSV QVMMVIYLAC ALLLTPWAHP LQVLELSPLQ GWLLLACCLN TLVAYGAFAE ALAHWEASRV SATLALTPLV TFVSVALAAS WWPDHVLPEQ VNWIAYAGAV VVVLGSALTA LGPSIMASWR ARAASIHLDE TEREQWTK
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