| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1683 |
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| Symbol | |
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| ID | 5109657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1851864 |
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| End bp | 1854167 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502912 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001187179 |
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| Protein GI | 146306714 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.907749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGT CCCATTCCCT CGGCTTCCCG CGCATTGGCC GCGACCGCGA ACTGAAGAAA
GCCCTCGAAG CCCACTGGAA AGGTGAACTG GACGAAGCCG GCCTGCGCGC CGTTGGTCAG
CGCCTGCGGG CCGAGCATTG GCAGCTGCAG AAGGACGCCG GTATCGACCT GCTGCCGGTG
GGCGATTTCG CCTGGTACGA CCAGGTGCTC GCTCATTCCC TGGCCTTCGA CGTGATTCCC
GAGCGCTTTC GCCCGGCCGC CGGCAAGCCG ACGCTGGATA CCCTGTTCGC CATGGCGCGT
GGGGCCGTTG CAAACAAGAG CGGTGGCAGT TGCTGCGGTG GTGCCCACGC GCAGGAGATG
ACCAAATGGT TCGATACCAA CTACCACTAC CTGGTGCCGG AATTCAGCGC TGATCAGCAG
TTCGCCCTGA GCTGGGAGCA ACTGTTCGAG GAAGTGGCTG AGGCGCATGC CCTCGGTCAC
AGCGTCAAGC CGGTGCTGAT CGGCCCGCTG ACCTATCTGT GGCTGGGCAA GGAAAAGGGC
AGCGACTTCG ATCGTCTCGA TCTGCTGGAG CGGCTGCTGC CGGTGTATGG CGAGATCTTC
CAGCGGTTGG CGGCGCAGGG CGTGGAATGG GTACAGATCG ACGAGCCGAT CCTGGTGCTG
GACCTGCCGC AGGCGTGGAA GAATGCCTTC GAGCGTGCCT ACAACCTGAT CCAGCGCGAG
CCGTGCAAGA AGCTGATCGC CACCTACTTC GGCGGCCTGG AGGACAACCT AGGTCTGGCC
GCCAACCTGC CGGTGGACGG TCTGCATATC GACCTGGTGC GCGCGCCCGA GCAGTACCCG
ACCATTCTCG ACCGCCTGCC AGCCTATAAA GTGCTGTCGC TGGGCATGGT CAACGGGCGC
AACGTCTGGC GCTGCGATCT GGAGAAGGTG CTCGAGCTGC TGCGCCATGC CCACGAACGT
CTTGGCGAGC GCCTGTGGGT CGCGCCGTCC TGTTCGCTGC TGCACAGCCC GGTTGACCTG
GAACGCGAGG ATCAGCTGGA CGCCGAACTG AAGAGCTGGC TGGCCTTCGC CGTGCAGAAG
TGCCAGGAGG TCGCCTTGCT CGGCAGGGCC CTGGAGGCGC CGGATGATGC CTCGGTGCAA
GCCGCGCTAG AGCAGAGCCG TGTGGTGCGG GCCGCCCGCG CCGCATCGAC GCGCATTCAC
AAACCCGAGG TGCAGGCGCG TCTGGCGGCG ATTCGTCCGC GTCATGCCCA GCGCCAATCG
CCGTTCGCCG AACGCATCGC GCAACAACGT GAATGCCTGC AGCTGCCGTT GCTGCCGACC
ACCACCATCG GCTCCTTCCC GCAGACCTCG GCCATCCGCC TGGCGCGACA GTCGTTCAAG
CAGGGCAAGC TGAGTGCGGC CGAGTACACC GAGGCCATGC ACGCCGAAAT TCGCCACGCC
GTTGAGGTGC AGGAGAACCT CGGTCTGGAC GTGCTGGTGC ACGGCGAGGC CGAGCGCAAC
GACATGGTCG AGTACTTCGC CGAGCAGCTC GACGGCTACG CCTTCACCCG CTTCGGCTGG
GTGCAGAGCT ACGGCTCGCG CTGCGTCAAA CCGGCGGTGA TAGTCGGCGA TCTGGGTCGT
CCGCAGGCCA TGACCGTGGA GTGGATCAAG TACGCCCAGG GCCTGACCGA CAAGCCGATG
AAGGGCATGC TGACCGGCCC GGTGACCATG CTGATGTGGT CCTTCCCGCG CGAGGACGTC
TCCCGCGAAG TGCAGGCGCG ACAGCTGGCG CTGGCCATTC GCGACGAGGT GGTGGATCTG
GAGGCGGCGG GTATCCGCAT CATCCAGATC GACGAGGCGG CGTTTCGCGA GGGGCTGCCG
CTGCGCCAGG CGGCCTGGCA AGGCTACCTG GACTGGGCGA CCGAGGCCTT CCGCCTGGCC
GCCAGCGGCG TGCGCGACGA GACGCAGATC CACACCCACA TGTGCTACAG CGAGTTCAAC
GATGTGATCG AGTCCATCGC CGCCATGGAC GCCGATGTCA TCACCATCGA GACCTCGCGT
TCTGACATGG AGCTGCTGGA GGCTTTCGAG CGCTTCGCCT ACCCCAACGA GATCGGCCCG
GGCGTCTACG ACATCCACTC GCCGCGCGTG CCGGACAGCG CCGAGATGGC CGGTCTGTTG
CGCAAGGCGG CGCGGCGAAT CCCGCTCGAG CGTCTGTGGG TCAACCCCGA TTGCGGCCTG
AAGACCCGTG CCTGGCCGGA GACCGAGGCG GCGCTGGTGA ACATGGTGGC GGCGGCCAGA
CAGTTGCGTG CCGAACTGGC CTGA
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| Protein sequence | MALSHSLGFP RIGRDRELKK ALEAHWKGEL DEAGLRAVGQ RLRAEHWQLQ KDAGIDLLPV
GDFAWYDQVL AHSLAFDVIP ERFRPAAGKP TLDTLFAMAR GAVANKSGGS CCGGAHAQEM
TKWFDTNYHY LVPEFSADQQ FALSWEQLFE EVAEAHALGH SVKPVLIGPL TYLWLGKEKG
SDFDRLDLLE RLLPVYGEIF QRLAAQGVEW VQIDEPILVL DLPQAWKNAF ERAYNLIQRE
PCKKLIATYF GGLEDNLGLA ANLPVDGLHI DLVRAPEQYP TILDRLPAYK VLSLGMVNGR
NVWRCDLEKV LELLRHAHER LGERLWVAPS CSLLHSPVDL EREDQLDAEL KSWLAFAVQK
CQEVALLGRA LEAPDDASVQ AALEQSRVVR AARAASTRIH KPEVQARLAA IRPRHAQRQS
PFAERIAQQR ECLQLPLLPT TTIGSFPQTS AIRLARQSFK QGKLSAAEYT EAMHAEIRHA
VEVQENLGLD VLVHGEAERN DMVEYFAEQL DGYAFTRFGW VQSYGSRCVK PAVIVGDLGR
PQAMTVEWIK YAQGLTDKPM KGMLTGPVTM LMWSFPREDV SREVQARQLA LAIRDEVVDL
EAAGIRIIQI DEAAFREGLP LRQAAWQGYL DWATEAFRLA ASGVRDETQI HTHMCYSEFN
DVIESIAAMD ADVITIETSR SDMELLEAFE RFAYPNEIGP GVYDIHSPRV PDSAEMAGLL
RKAARRIPLE RLWVNPDCGL KTRAWPETEA ALVNMVAAAR QLRAELA
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