| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1681 |
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| Symbol | |
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| ID | 5109655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1849872 |
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| End bp | 1850522 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502910 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001187177 |
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| Protein GI | 146306712 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.977422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTACC AGGATCAACT CTTCCAGCAA CGGGAAAACG CCCTGCTCGA ATCCGCTCGC
CAGCTGTTTC AGGAGCAATC CTGGGACCGC GTCACCATCG CCGAAGTGGC GCTTCACGCC
GGCATCGGCA AGGGCACGGT GTACAAGCAC TTTTCCAGCA AGGAGGCGCT CTATGCCCGC
CTGGTACTGG ACTGCTCGCG CCGGCACCTG AGCGAACTGC GCGAAGTCGC GAACCAGGCA
TCACCGCAGG CAGCCATGCG CCGGGTGATT CGCCGCGCCT TCGAGCAATT GCTGGCCGAC
CCGCTGCAGG CCGAGCTCTG TCTGCTATGC GACCGCCCGG CCTTTCAGGA GCGCCTGGAC
GCGCCCTACC GTGAACAGTT CATCGAGCTG GAAGGCCAGT ACATGGCTCT GTTCAACCAG
TTGCTGCGAG GCAGCTTCGG CGAGCTCTCC CCCGCGCACT GCCAGAACCT GTTGTGGGGC
GTCGAAGCCT GCGTCAACGG CGTGATGGCC CGCATCGCCT CGGGCGGTTT CGCTCACTGG
GCCGAGCCCA TCGAACTGGA CGCCTATTTC GAACGCGTCA CCGATTTCAT CATCGCCGGC
CTGCAAGGCC AGGCCGCCGC GCTGCAAGCA GCGCCTGCAC TCAGCGAGTA A
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| Protein sequence | MRYQDQLFQQ RENALLESAR QLFQEQSWDR VTIAEVALHA GIGKGTVYKH FSSKEALYAR
LVLDCSRRHL SELREVANQA SPQAAMRRVI RRAFEQLLAD PLQAELCLLC DRPAFQERLD
APYREQFIEL EGQYMALFNQ LLRGSFGELS PAHCQNLLWG VEACVNGVMA RIASGGFAHW
AEPIELDAYF ERVTDFIIAG LQGQAAALQA APALSE
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