Gene Pmen_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1671 
Symbol 
ID5109645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1833699 
End bp1834805 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID640502900 
Producthypothetical protein 
Protein accessionYP_001187167 
Protein GI146306702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0836481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.410877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCGG TGATGAACTC GGCCAGCAAG GTCAACGGAA TTCTCTTCTG CGTGATGCTG 
TGCGCCATGT TCCTGTACTC GCTGCCGGCG GTATTCGCCT TCGCCGGCAC CCAGACCCAG
GCCCTGTCGC TGTTTCTCGA CGGCAAGCTG GTGCGCAAGT TCGAGCAGTT CTACGACAAG
CAACTGTTCC TGCGCGACCC GTCCGTCGAG CTGTGGGCCA ACATCCAGCA CGCGATCTTT
CGCGAAGGCG CCAGCGGCGT GGTGCTGGGG CGTGACGGCT GGCTGTTCAC CAACCAGGAA
TACCTACAGC CCAGGGACTT GGACGGCAAC CTGGAGCGGC AACTGGTGCT GATCGACAAG
GTGCGCGCGC AGCTGGCGCA ACAGGGCGCG CGGCTGATCG TCCTGCCGGT TCCGATGAAA
CTGGACACCT ACGCCGCCCA TTCCACTTAT GCGCCTTCGC CGCAGATCAG CGGCCTTTAC
GAGCAGTTCA GCCAACGCCT GCGCGAACGC GGAATCGACA CGGTGGATCT GCGCAGCGCC
TACCTGAGCG CCGCGGCCGA TGAGCCGCTG TTCCTGCGTA ACGATACCCA CTGGAGTCCG
AGAGGCGCCG AGCTGGCCGC CCGGACCCTG GCCGGGCAGT TTCCCGAGCT GATCGGCGAG
ACCCCCTACC TCACCCAGGC CGTCAGCGAG AAAGAGGTGA CCGGCGACCT GCTCAACTAC
CTCAAGTTCG ACCCCAGGCT GGCGCCCAGC TATTTCGAGC CGGTGCATAT CCAGCTCTAC
GAAACCCTGC AACAGAGCCG CAACGACCTC GCCGCCAGCC TGTTCGGCGA AGAGGCCGTG
TCCTTGGCCC TGGTGGGCAC CAGCTACACG CGCATCGATG ACTGGAACTT CGTCGGCTTT
CTCAAGGAGG CCCTGCAGCG TGACCTGGTG AGCGTCGCAC TGGAGGCCCG CGGCCCGTTC
CAGTCGATGA ATGAATTTCT CGCCGGCCCG GCCGCTCAAA GCGGTGAGCT GCAGACGGTC
ATCTGGGAGT TTCCCCTGCG CACCCTGCTC GCTCAGCGCC AGATTCCTTC GCCCCTGGCC
ACGCCAGAAA CTGCCCAACT CCAATAA
 
Protein sequence
MFPVMNSASK VNGILFCVML CAMFLYSLPA VFAFAGTQTQ ALSLFLDGKL VRKFEQFYDK 
QLFLRDPSVE LWANIQHAIF REGASGVVLG RDGWLFTNQE YLQPRDLDGN LERQLVLIDK
VRAQLAQQGA RLIVLPVPMK LDTYAAHSTY APSPQISGLY EQFSQRLRER GIDTVDLRSA
YLSAAADEPL FLRNDTHWSP RGAELAARTL AGQFPELIGE TPYLTQAVSE KEVTGDLLNY
LKFDPRLAPS YFEPVHIQLY ETLQQSRNDL AASLFGEEAV SLALVGTSYT RIDDWNFVGF
LKEALQRDLV SVALEARGPF QSMNEFLAGP AAQSGELQTV IWEFPLRTLL AQRQIPSPLA
TPETAQLQ