Gene Pmen_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1666 
Symbol 
ID5106567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1828235 
End bp1828915 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content57% 
IMG OID640502895 
Producthypothetical protein 
Protein accessionYP_001187162 
Protein GI146306697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.398713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACC TGTCCACCTG GAACCTGACT CTCCCTGTAG GTGTTCCTGC TGCTGTCATT 
TCTACCCCCG TTCTGGCTGG GGGCTATCAG GATCACTACT TTCAGTCCAA GGAAGGCAGG
ATTTTTTTCT GGGCACCGGT TAATGGGTCC ACCACCGCCA ACTCGGTCTA CCCCCGCAGT
GAGTTGCGCG AGACGTTCGC CAACGGCTCT TTGCGCAACT GGTCCTTTAC CGCTGCGGAT
AACGTGATGA CTGCCACGGC ACGAATTGCA CAGGTACCCT CGAGCGGGCT GATTGCGTTT
TCCCAGATCC ACTCGAAGAA CAGCGTCTCG CCGACGCTGA TGCTGGGCTA TCAATCCGTA
TCACCTACTG GCTATGGCAG TGTGGTGATC TCGTTCCGGG GCAATCCGGC CAGCGAGAAT
TCAACCAAGG TTGTGCTCTC GAACAGAATC AAGCTGAATC AGGACTTCAG CTATGAGGTC
TTTCTGGCCA AGAACGGCGT ACTGACCATT GGCCTGGTCG AGCCTGATGG CACGTTGAGA
AGCTGGAGCG GCGTGCTCAA TTCGGCCTGG GCAAGTCATG GCTTGTACTT CAAGGCGGGC
GTTTACACGC TCGACAACAA CGGCAATGAG ACCAGTGCGG GGGCTGCCGT GTTCTCGCGG
TTGCAGGTCG AGCACCGCTA G
 
Protein sequence
MIDLSTWNLT LPVGVPAAVI STPVLAGGYQ DHYFQSKEGR IFFWAPVNGS TTANSVYPRS 
ELRETFANGS LRNWSFTAAD NVMTATARIA QVPSSGLIAF SQIHSKNSVS PTLMLGYQSV
SPTGYGSVVI SFRGNPASEN STKVVLSNRI KLNQDFSYEV FLAKNGVLTI GLVEPDGTLR
SWSGVLNSAW ASHGLYFKAG VYTLDNNGNE TSAGAAVFSR LQVEHR