Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1666 |
Symbol | |
ID | 5106567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1828235 |
End bp | 1828915 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640502895 |
Product | hypothetical protein |
Protein accession | YP_001187162 |
Protein GI | 146306697 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.398713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGACC TGTCCACCTG GAACCTGACT CTCCCTGTAG GTGTTCCTGC TGCTGTCATT TCTACCCCCG TTCTGGCTGG GGGCTATCAG GATCACTACT TTCAGTCCAA GGAAGGCAGG ATTTTTTTCT GGGCACCGGT TAATGGGTCC ACCACCGCCA ACTCGGTCTA CCCCCGCAGT GAGTTGCGCG AGACGTTCGC CAACGGCTCT TTGCGCAACT GGTCCTTTAC CGCTGCGGAT AACGTGATGA CTGCCACGGC ACGAATTGCA CAGGTACCCT CGAGCGGGCT GATTGCGTTT TCCCAGATCC ACTCGAAGAA CAGCGTCTCG CCGACGCTGA TGCTGGGCTA TCAATCCGTA TCACCTACTG GCTATGGCAG TGTGGTGATC TCGTTCCGGG GCAATCCGGC CAGCGAGAAT TCAACCAAGG TTGTGCTCTC GAACAGAATC AAGCTGAATC AGGACTTCAG CTATGAGGTC TTTCTGGCCA AGAACGGCGT ACTGACCATT GGCCTGGTCG AGCCTGATGG CACGTTGAGA AGCTGGAGCG GCGTGCTCAA TTCGGCCTGG GCAAGTCATG GCTTGTACTT CAAGGCGGGC GTTTACACGC TCGACAACAA CGGCAATGAG ACCAGTGCGG GGGCTGCCGT GTTCTCGCGG TTGCAGGTCG AGCACCGCTA G
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Protein sequence | MIDLSTWNLT LPVGVPAAVI STPVLAGGYQ DHYFQSKEGR IFFWAPVNGS TTANSVYPRS ELRETFANGS LRNWSFTAAD NVMTATARIA QVPSSGLIAF SQIHSKNSVS PTLMLGYQSV SPTGYGSVVI SFRGNPASEN STKVVLSNRI KLNQDFSYEV FLAKNGVLTI GLVEPDGTLR SWSGVLNSAW ASHGLYFKAG VYTLDNNGNE TSAGAAVFSR LQVEHR
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